Rhizobium etli bv. mimosae Mim1: REMIM1_PD00131
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Entry
REMIM1_PD00131 CDS
T02778
Name
(GenBank) OmpA/MotB family outer membrane protein
Organism
rel
Rhizobium etli bv. mimosae Mim1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4384
OmpA
TPR_1
TPR_2
SHNi-TPR
TPR_10
TPR_8
TPR_11
Motif
Other DBs
NCBI-ProteinID:
AGS24748
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Position
pRetMIM1d:152972..154933
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AA seq
653 aa
AA seq
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MLSRKAILAAATCLSLFSPIPEVGAQNERTLTEAPAQSGPVSITFDRAEARYAIGEVVGL
FIQSSENAYVTVLNVSPNGSVTKLFPNKYQTDALVAAGKRVQVPDPASGARLQVSGPVGQ
EQIKVFYSSKPLTIFADLGGSGSGMFRSIDGGMDAVSRSLEEARSLGTKISSKTLTLTTV
DSTAALPPPAVPPVAAVPAAKPAPVEQAAKPPVAPKPPAAPKPKPAVKPEVAKKPQVIEK
PKPAPKPVEQATTQPPKKYKIVTNLAPGQELAADELQLIGPADTTASTRPSQYKQPSQYQ
QPYKQPSQSAQTKMPKLPMPQIKMPQFKLPGGFSIKMPPLSFGRSAEPGQAGEEIEVANA
DTPACNALLDKLNAAVAAKDITAAASEADAIAVSADCGQFQVNAQRRVAALRLAAAQEMM
AADRPVAEYEPLLVAADSPQVLWQASATLGEIYFSARRFADAAADYQQAIEIIKNETRTP
KAPPADTISDLIQRAAQARILAANPTSDNPQGSFVPAEKDHRSGVLGGIYSENVRGIVPV
SIPVPITFDFDKSTFTSIGTEAAEELLEALKEQKPGRVILIGHTDRKGGDDYNQKLSERR
AQAVADFLKNHGIDATIDAEGRGSSEPVDVTATANLTEDDIDALNRRVEWRRE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgctcagccgcaaagccatcctagccgcagccacatgtctttcgcttttttcgccgatc
cccgaggtcggggcgcagaacgaacgcacgctgacggaagcgccggctcagagcggacct
gtcagcatcaccttcgatcgcgccgaggcgagatacgccatcggcgaagtcgtcggcctc
ttcatccagtcgagcgagaacgcttatgtcacggtgctgaacgtctcgccgaacggctcc
gtcaccaagctcttcccgaacaaataccagaccgatgccctcgtcgccgccggcaagcgc
gtacaggtgccggatccggcaagcggcgccaggctgcaggtttcaggcccggtcgggcag
gagcagatcaaggtcttctattcctccaagccgctgacgatcttcgccgatctcggcggc
agcggcagcggcatgttccgctcgatcgacggcggcatggatgccgtttcccgcagcctc
gaagaagcccgcagcctgggcaccaagatcagcagcaagacgctgacgctgaccaccgtc
gacagcacggcggccctgccgcctcccgccgtcccgcccgtcgccgccgttcccgccgca
aaacccgcgccggtcgaacaggcggcaaagccgcccgttgcaccgaaaccgccggccgct
ccgaagccgaagccggccgtcaaacccgaggtcgctaagaagcctcaggtgatcgaaaaa
ccgaagccggcgccgaaacccgtcgaacaggcgacgacccagccgccgaaaaaatacaag
atcgtcaccaatctggcgcccggccaggagctggccgccgacgagctgcagctgatcggc
ccggccgacaccaccgcctccacccgccccagtcaatataaacaaccgagccaatatcag
cagccgtataagcagccgtcccagtctgcccagaccaagatgccgaagctgccgatgccg
cagatcaagatgccgcaattcaagcttcccggcggtttcagcatcaagatgccgccgctg
agcttcggtcgttcggccgaacccggccaggccggcgaggagatcgaggtggccaatgcc
gatacgcccgcctgcaacgccctgctcgacaagctgaacgcggccgttgccgccaaggac
atcaccgctgccgcttccgaggccgatgcgattgccgtcagcgccgattgcggccagttc
caggtgaacgcccagcgccgcgtcgcagccctcaggctcgccgccgcccaggagatgatg
gcggccgacaggccggtcgccgagtatgagccgctgctcgtcgccgccgacagcccgcag
gtgctctggcaggcctccgccacgctcggcgagatctatttctccgcccgccgctttgcc
gatgccgccgccgattaccagcaggcgatcgagatcatcaagaacgagacccgcacgccg
aaggcgccgccggccgatacgatctccgatctcatccagcgcgccgcccaggcccgcatc
ctcgccgctaatcccaccagcgacaacccgcagggcagcttcgtgccggccgagaaggat
caccgcagcggcgtgctcggcggcatctattcggagaatgtgcgcggcatcgtgccggtc
tccatcccggtgccgatcaccttcgatttcgacaagtcgaccttcacctcgatcggcacc
gaagccgctgaggaattgctggaagcgctgaaggagcagaagcccggccgcgtcatcctc
atcggccataccgatcgcaaaggcggcgacgattataatcagaagctctccgagcgccgc
gcccaggccgttgccgatttcctgaagaaccacggcatcgacgccacgatcgacgccgaa
ggccgcggctcctccgagccggtggacgtcaccgccaccgccaacctcaccgaagacgat
atcgacgcgctcaaccgccgcgtcgaatggcgccgcgaatag
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