Rhizobium etli bv. mimosae Mim1: REMIM1_PD00219
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Entry
REMIM1_PD00219 CDS
T02778
Symbol
glgX-2
Name
(GenBank) glycogen debranching enzyme GlgX 2
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00500
Starch and sucrose metabolism
rel01100
Metabolic pathways
rel01110
Biosynthesis of secondary metabolites
Module
rel_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
REMIM1_PD00219 (glgX-2)
Enzymes [BR:
rel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
REMIM1_PD00219 (glgX-2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
DUF4874
Motif
Other DBs
NCBI-ProteinID:
AGS24832
LinkDB
All DBs
Position
pRetMIM1d:249231..251387
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AA seq
718 aa
AA seq
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MSFSFSELDFLKPELGAEYTGSGTHFAVFSAHAEQIELCLFSPDGKDEIARLPLPKREGD
IWSGYIAGIGPGTVYGYRAHGPYDPSAGHRFNPNKLLLDPYAKQVTGELQWHDALFGYRI
GEDDLSFDDRDSAPFMVKGVVQDPDFDWAGEEAIRRPWPDTIIYEAHVRGLTMTHPKVPD
RLRGTFLGMCSDPIIDHLIKLGVSAIELLPIQYFVDDRYLLEKRLRNYWGYQTLGFFAPQ
SRYLSSDKITEIKTMVKRFHAAGIEVIMDVVYNHTAEGSEKGPTLSFRGLDNASYYILSP
DDPRHTFDTTGTGNTLNVANPMVMRMVLDSLRYWVGVMHIDGFRFDLASTLGRQDLEFDR
QGLFFGAIRQDPILAGVKLIAEPWDIGAGGYQVGGFPHPFREWNDKFRDDVRRFWKGDGG
MVSELAARITGSAPQFNHSDRGATSSINLLSAHDGFTLMDTVSFDGKHNEANGEDNRDGH
SDNHSDNMGVEGATDNADINAARARRRRNMMATLMLSQGVPMILAGDELGNSQGGNNNAY
CQDNETGWTGWDGLEDPFLDFCRQAVAFRKAHPVLRQERFLTGETSEDGRIEIAWYKPDG
NFMDDAAWNDDGLQVLGVYFSKSVHALDTEKMDDLFLVFNAGGDCEVHLPIVNGLKQWSR
VLDTGAETGAFDVHDEVNPVMVYTQSVAVFAPTGQTQPPEGATKAQRRRWFQLGRWGK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttcattttcggaactcgacttcctcaagccggagctgggggcggagtatacg
ggttccggtactcattttgccgtcttctctgcgcatgccgaacagatcgagctctgcctg
ttttcccctgacggaaaggatgagatcgcccggctgcccttgcccaaacgcgagggcgac
atctggtcgggctatatagccggtatcggaccgggcaccgtatacggctatcgcgcccat
ggcccctatgatcccagtgccggccatcgcttcaacccgaacaagctgctgctcgacccc
tatgccaagcaggtgacgggcgagctgcaatggcatgatgcgctgttcggctatcggatc
ggcgaggacgatctttccttcgacgaccgtgacagcgcgcccttcatggtcaagggcgtc
gtgcaggatccggatttcgactgggcgggtgaagaggcgatccggcggccctggccggat
accattatctacgaggcgcatgtgcgcggcctgacgatgacgcatccgaaagtgcccgac
cggctgcgcggcacctttctcggcatgtgcagcgatccgatcatcgaccacctcatcaag
ctcggtgtctcggcgatcgagctgctgccgatccagtatttcgtcgacgaccgctatctc
ctggaaaaaaggctaaggaactattggggctatcagacgctcggcttcttcgcgccgcaa
tcgcgctatctctcgagtgacaagatcaccgaaatcaagaccatggtaaagaggttccat
gcggccggcattgaggtcatcatggacgtggtctacaaccatacggccgaaggcagcgag
aaagggccgacgctctccttccgcgggctcgacaatgcgagttattacatcctctctccc
gatgatccccgccataccttcgatacgacgggaaccggcaacacgctgaatgtcgccaat
cccatggtgatgcgcatggtgctcgacagcctgcgctattgggtcggcgtcatgcatatc
gacggtttccgtttcgatcttgccagcacactcgggcgacaggatctggaattcgaccgc
caggggctgttctttggcgccattcgccaggatccgatccttgccggcgtcaagctgatc
gccgagccctgggatatcggcgcgggcgggtatcaggtcggcggtttcccccatcccttc
cgcgagtggaacgacaagttccgcgacgacgtgcgccgtttctggaagggcgacggcggc
atggtgtcggagctggcggcgcgcatcaccggctcggcgccgcaattcaatcactccgat
cggggcgcgacctcctcgatcaatcttctgtcggcccatgacggcttcacgctgatggat
acggtttccttcgacggcaagcacaacgaggcgaacggcgaggataatcgggacggtcat
tcggacaatcattccgacaatatgggcgtcgagggcgccaccgataatgctgacatcaac
gcggcgcgtgcacgccgccgccgcaacatgatggcgacgctgatgctctcccagggtgtg
ccgatgatcctggccggcgacgagcttggcaacagccagggcggcaacaacaacgcctat
tgccaggacaatgagaccggctggacgggttgggatgggctcgaggatcccttcctcgat
ttctgccggcaggcggtcgccttccgcaaagcccatcccgtcctgcgccaggagcggttc
ctgaccggtgagaccagcgaggacgggcggatcgagatcgcctggtacaagccggacggc
aatttcatggacgatgcggcctggaacgacgatggattgcaggtcctcggcgtgtacttc
tcgaagagcgtgcacgcactcgatacagagaagatggatgacctcttcctcgtcttcaac
gccggcggtgattgcgaagttcatctgcccatcgtgaacggactaaaacagtggtcacgg
gttctcgacaccggggctgagaccggtgctttcgacgtgcacgacgaggtcaatcccgtc
atggtctatacccagagcgtggccgtcttcgcgccgacaggccagacccaaccgccggaa
ggggcgaccaaagcccagcggcgccggtggtttcagctcggccgctggggcaaatag
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