Rhizobium etli bv. mimosae Mim1: REMIM1_PD00424
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Entry
REMIM1_PD00424 CDS
T02778
Name
(GenBank) DNA polymerase III subunit epsilon DnaQ-like protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel03030
DNA replication
rel03430
Mismatch repair
rel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
REMIM1_PD00424
03430 Mismatch repair
REMIM1_PD00424
03440 Homologous recombination
REMIM1_PD00424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rel03032
]
REMIM1_PD00424
03400 DNA repair and recombination proteins [BR:
rel03400
]
REMIM1_PD00424
Enzymes [BR:
rel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
REMIM1_PD00424
DNA replication proteins [BR:
rel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
REMIM1_PD00424
DNA repair and recombination proteins [BR:
rel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
REMIM1_PD00424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AGS25034
LinkDB
All DBs
Position
pRetMIM1d:complement(450357..451337)
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AA seq
326 aa
AA seq
DB search
MSVHRDSQLDMFAKASPAMAEARGPSRRRPSPPAARSDEDMARALEESGNYRILRKLAAR
PVAAARRPGFSRFGVILDTETTGLNHRSDEIIEIGAVAFTFNDDGAVGDVVGIYGGLQQP
SRPIPPDITRLTGITDVMVEGQTIDMPSLNALIEPADLIIAHNAGFDRPFCEAFSPIFAG
KAWACSVSEIDWSARGFEGTKLGYLVGQAGYFHGGHRAVDDCHALLEILDRRQGDGESPF
AELYRASQRCRVRIFAEHSPFEMKDHLKARGYRWSDGSDGRLKSWWIEVGEDDLGDELSY
LRSEIYRWKEADPPLVRLTAFDRFKA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcacagagattcgcaactcgacatgtttgccaaggcatcgcccgcaatggcc
gaggcacgtggcccttcgcgccggcggccgtcaccgccggcggcccgctccgacgaagac
atggcgcgcgcgcttgaggagagcggcaattaccgcatcctgcggaaactcgccgcccgg
ccggtcgcggcagcgagacggccgggtttttcgcggttcggcgtcattctcgataccgag
acgacaggcctcaatcaccgcagcgacgagatcatcgaaatcggcgcggtcgccttcacc
ttcaacgatgacggagcagtcggcgatgtggtcggcatctatggcggtctgcagcagccg
tccaggccgatcccgcccgacatcaccaggctgaccgggattaccgacgtcatggtcgaa
ggacagaccatcgacatgccgtcgctgaatgccctgatcgaaccggcggatctcatcatt
gcccacaatgccgggttcgaccggccgttctgcgaggccttctcgcccatcttcgccggc
aaggcctgggcgtgctcggtttcggagatcgactggagcgcccgcggtttcgagggcacg
aagctcggttatctcgtcggccaggccggttacttccacggaggccaccgcgcggtggac
gactgccacgcgctcctggagatcctcgatcgacggcaaggcgacggtgaaagccccttc
gccgagctgtaccgggccagccaacgctgccgcgtccgcatctttgccgaacacagccca
ttcgagatgaaggatcacctgaaggcaaggggctaccgctggtcggacggaagcgatggc
cgcctgaaatcctggtggatcgaagtcggcgaagacgatctcggcgacgagctttcctat
ctgcgttcggaaatctatcggtggaaggaggccgatccgccgctcgtccggctgacggcc
ttcgatcgcttcaaagcctga
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