Rhizobium etli bv. mimosae Mim1: REMIM1_PE00008
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Entry
REMIM1_PE00008 CDS
T02778
Name
(GenBank) P-loop NTPase domain-containing protein
KO
K26273
protein strawberry notch
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rel03036
]
REMIM1_PE00008
Chromosome and associated proteins [BR:
rel03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
REMIM1_PE00008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
AGS25100
LinkDB
All DBs
Position
pRetMIM1e:7435..11823
Genome browser
AA seq
1462 aa
AA seq
DB search
MNIISHPQTVSASPRLETKTGAEALLKAAEQVTLFLEHGQVITAGDLRQIMTVIFGGSDA
QGLWLWKDAYEATEIAQVLFLRKFRSIASRTQSPQSTLAMVMRLARLLPPHTRRSDESQA
LQQFSTPIPLAYVASRAAGITAADVVLEPSAGTGLMAIFAELSGARLALNEYAAVRCSLL
ERLFPTVPISRHDAAHIDDHLDRFVRPTVVLMNPPFSAGAHVEGRVTDAAWRHLTSAFAR
LAPGGRLVAITGANLSAESSAWRDAFVRLQGQGTVLFTAAIDGSIYARHGTTMETRLIVI
DKMPAEDPTRLPPSKGTAQDLETLLNWISGLPMRAPLTPPNSSGAPRSGILRADTMRPAA
SATSHRPGVGGQAGPAATVRPIPVDGEIIELSYELRDAQPKDETNAADGIYEAYRLQSIH
IPNAKPHPDRLVESVAMASVAPPKPSYRPHLPERVVTGGDLSNAQLESVIYAGEAHSGYL
AGHWSLDASFDNLKAVASDAEHVVRFRRGWFLGDGTGAGKGRQAAGIILDNWLKGRRRHV
WISKSDKLIEDAQRDWSALGQEKLLVTPLSRFRQGKPVKLDEGILFTTFATLRTDEREGK
RSRVQQIVQWLGADFDGVIVFDEGHAMANAAGGKTERGDKAASQQGRAGLRLQRALPDAR
VVYVSATGASEVESLAYAERLGLWGSSDFPFPTRSEFIAAIEDGGVAAMEVLARDLKAMG
LYASRSLSFEGVEYEILEHELTEEQVRIYDAYAEAFQVIHNHLDAAMEASGITGKTGTLN
KNAKAAARSAFESSKQRFFNHLLTSMKTLALLKATAADLDEGHAAIVQLVSTGAALTERR
LAQIPTEEWGDLQVDVTPREYVIDYLMHSFPVQLFEEFSDADGNLSSRPVHDVDGNPVIC
REAERRRDELVETLGSLPAIPTALDQIVQHFGISKVAEITGRSRRIIRREDRSSIARYAV
QSRPGSANLDEARAFMDDEKGILVFSDAGGTGRSYHADLAAKNQRLRLHNLLEAGWRADV
AIQGLGRSHRTNQKQPPRFRMIATNVKAERRFLSTIARRLDTLGAITRGQRQTGGQGMFR
SEDNLESQYARDALRQFYGLLHAGRIERCSLEKFESITGLSLTSEEGGLKDELPPIQTFL
NRMLALTIAMQNVLFEAFEQLLAARIEGAIAAGIYDKGLETITADSMRVTDRRLIYTHPV
TGAQSHLLTIERRDSNAPMRLEEVQSLVQQDPRARLMVNGKSGRPAVMVPTRSIMLDDGS
VQPRVSLIRPMDELRFEVRQLEETSWEEADEKVFSDAWDAEVAAVPEFSTSTMHIVSGLL
LPIWKLLPQDFCRVRRLQTDDGQRIVGRVIAPDRLTGLCRNFGIDQTQVLSADQAWASLV
DGSSIVGLAGGMTFRRVRVMNDYRVELIGFTDGMRDWLRSVGLFSEMINWKLRFFVPVTD
QGPVILSKLMQRHRLVEIARRS
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatctcacatccccaaaccgtttccgcttctccgcgccttgaaaccaaaacc
ggcgctgaggcacttctcaaggctgccgaacaagtcacgttgtttctggagcatggtcaa
gtcatcactgcgggtgaccttcggcaaatcatgacagtgattttcggaggcagcgatgcc
cagggtctctggctctggaaggatgcctatgaagcgaccgagatcgcccaggttctgttc
ctgcgcaaattccgctcaattgcttcccggacccagtcacctcaatcgacgcttgcgatg
gtgatgcggctggcgcgactcctgccaccacacacccgccgatccgacgagagccaggcg
ctacagcagttctcgaccccgatcccgcttgcctacgtcgcatcgcgtgctgccggcatc
acggccgctgacgtggtcctcgaaccgtcggctggaaccggcctcatggcaatctttgcg
gaactctcgggcgcgcgcctggcgctcaacgaatatgcggctgtccggtgctcgctgctg
gagcggcttttccccaccgttccgatatcgcggcacgatgccgcgcatatcgacgatcac
ctcgaccgtttcgtccgaccaacggtcgtactgatgaacccgccattctccgcaggcgct
catgtcgaaggtcgtgtcaccgacgccgcctggcggcatctcacatccgcatttgcccgt
cttgcccccggcgggcggttggtcgcgatcactggggcaaacctttctgcggagagttcg
gcatggcgcgatgctttcgttcgcctccaggggcaaggcaccgtgctgttcaccgcggcg
atcgacggcagcatctatgcccgtcatggcacgacgatggaaacgcgcctcatcgtcatc
gacaagatgccggcagaggatccgacgcggcttcctccgtccaagggcactgcgcaggat
ctggaaacactacttaactggatcagcggccttccaatgcgtgcgcccctgacgccgccg
aactccagtggagcaccccgcagcggtatcctgcgcgcggacacaatgcgtccagcagca
agcgccacgtcgcatcgccccggggtcggaggacaggcggggcctgcagcaacggtgcgt
ccgatacctgtcgatggcgaaatcatcgaactttcctatgagctgcgagacgctcagccc
aaagatgagaccaatgccgctgatggcatctacgaggcctaccggctgcagtcgatccac
atccccaatgcaaaaccgcatcccgataggttggtcgaatccgtggcgatggcatccgtc
gcgccgccgaagccgagttatcgtccacacctgccggagcgcgtcgtcaccggcggcgac
ctctccaatgcccagctcgagagcgtcatctatgctggcgaagcccattccggctatctc
gccggccattggagcctcgatgcctccttcgacaatctcaaggccgtcgcatcggatgca
gaacatgttgtccgcttccgtcgcggctggtttctcggcgacggaacaggcgccggcaag
ggtcgccaggccgccggcatcattttggacaactggctaaaaggccgcagacgccatgtc
tggatttcaaaatcggataagctgatcgaggatgcccagcgcgactggagcgcgctgggc
caagaaaagctgctcgtgacacccctgtcgcgtttccggcagggcaagccggtcaagctg
gacgaaggcatcctcttcaccacctttgccacgctgcgcactgacgagcgtgagggcaag
cgctcgcgcgtgcaacaaatcgttcaatggctcggcgccgacttcgatggtgtcatagtc
ttcgatgaaggccatgccatggcgaatgcggccggtggcaagacggagcgcggtgacaaa
gcggcgtcacaacagggcagggcgggccttcgcctgcaacgcgcgcttccggacgcccgc
gtcgtctatgtctcggcgaccggcgcatcggaagtggagtcgcttgcctatgccgaacgc
ctcggtctctggggtagcagcgactttcccttcccgacccgttccgagttcatcgcggct
atcgaggatggcggtgtggcggcgatggaagtgctcgcccgcgacctcaaggccatgggg
ctttatgcctcgcgttcgctctccttcgaaggcgttgaatacgaaatcctcgaacacgaa
ctgaccgaggaacaggtccgcatctacgacgcctatgccgaagccttccaggtcatccac
aaccatctcgacgctgccatggaggcatccggaataaccggcaaaacgggaacgttgaac
aaaaacgccaaggcggccgcgcgctcggccttcgaaagctcgaagcagcgtttcttcaac
catcttctgacctcgatgaagacgctggccctcctcaaagcgaccgctgcagatttggac
gaaggtcatgctgcgatcgtccagctcgtctcgacgggagcggctctgaccgagcgccgg
ctggcgcagatcccgaccgaggaatggggcgatctgcaggtcgacgtcacgccgcgggaa
tatgtcatcgactacctgatgcactccttcccggtgcagctcttcgaggagttttccgat
gctgatggcaatctgagttcccggcccgtccatgacgtggatggcaaccctgtcatctgc
cgggaggccgaacggcgtcgcgacgaactggtcgagacgctgggcagcctgccggccatc
ccgacggccctcgaccagatcgtccagcatttcggcatcagcaaggtcgctgagatcacc
ggccgctcccgccgcatcattcgccgggaggatcgcagctccatcgcccgctatgccgtg
caaagccggccgggcagcgccaatctcgacgaagcccgcgccttcatggatgacgagaag
ggcattctcgtcttcagcgacgccggcggaaccggcagatcctaccacgcggatcttgcc
gccaaaaatcagcgtctgcgtcttcacaaccttctggaagcgggctggcgagccgacgtg
gcgatccagggtctcggccgtagccatcgcaccaatcagaaacagccgcctcggtttcgg
atgatcgccaccaacgtcaaggccgaacgacgtttcctctcgaccattgcccggcgtctc
gacacgctcggcgccatcacacgcggtcagcgccaaaccggcgggcaggggatgttccgg
tccgaggacaacctcgaatcgcaatatgcccgcgacgcgctgcggcaattctacggactg
ctgcatgccggcaggatcgaacgctgctcgctcgagaagttcgaaagcatcaccggcctg
tcgctgacctcggaggagggcggactgaaggatgagctgccgccgatccaaaccttccta
aatcgcatgctggcgctgacgatcgccatgcagaacgtgctgttcgaggctttcgaacaa
ctcttggccgcccgcattgagggagcgattgccgccggcatctatgacaaagggcttgag
acgatcaccgccgacagcatgagggtcaccgaccgccggctgatctacacccatccggtc
accggcgcgcagtcgcacttgctgacgatcgaacgccgggatagcaatgcaccgatgcgg
ctcgaggaggttcagagccttgtgcagcaggatccgcgcgccaggctgatggtcaacggc
aagtctggcaggcccgcggtgatggtgccgacgcgctcgatcatgctggacgatggctct
gttcagccgcgcgtgtcgctgatccggccgatggacgagctccgcttcgaagtccgccag
ctcgaagagacaagttgggaagaagccgacgaaaaggtcttctcagatgcctgggatgcc
gaggtggctgccgtgccggaattttcgacgtcgacgatgcatattgtcagcgggttgttg
ctgccgatctggaaattgctgccgcaggacttttgccgcgtgcggcgtctgcagacggac
gacggccagcggatcgtcggccgtgtcatcgctcccgatcggcttaccggcctctgccgc
aatttcgggatcgatcagacgcaagtgctgagcgccgaccaggcctgggcatcgctggtc
gacggatcctcgatcgtcgggcttgccggcggcatgacgttccgccgcgtgcgggtgatg
aacgactaccgcgtcgaactcatcggcttcaccgacggcatgcgcgactggctgcggtcg
gtcggcctgttctccgagatgatcaattggaagctgcgtttcttcgtgccggtgacagac
caggggccggtgatcctgtcgaagctgatgcagcgtcatcgcctcgtcgaaatcgcgcgc
cggtcgtga
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