Rhizobium etli bv. mimosae Mim1: REMIM1_PE00239
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Entry
REMIM1_PE00239 CDS
T02778
Symbol
gabD-2
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+)) 2
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00250
Alanine, aspartate and glutamate metabolism
rel00310
Lysine degradation
rel00350
Tyrosine metabolism
rel00650
Butanoate metabolism
rel00760
Nicotinate and nicotinamide metabolism
rel01100
Metabolic pathways
rel01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
REMIM1_PE00239 (gabD-2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
REMIM1_PE00239 (gabD-2)
00310 Lysine degradation
REMIM1_PE00239 (gabD-2)
00350 Tyrosine metabolism
REMIM1_PE00239 (gabD-2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
REMIM1_PE00239 (gabD-2)
Enzymes [BR:
rel01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
REMIM1_PE00239 (gabD-2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
REMIM1_PE00239 (gabD-2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
REMIM1_PE00239 (gabD-2)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AGS25327
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Position
pRetMIM1e:263994..265427
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AA seq
477 aa
AA seq
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MYTKLALLIDGEWIEETSAGSEVVLNPATEQPLGTLPHAGKPELDRALAAASRSFESWKR
TSPFERGQILRRAANLMRERVDRIATVLTLEEGKTLPEAKGEIIASAEFFDWFAEEGRRS
YGRVIPARLADMRQTVTQEPVGPVACFTPWNFPAVTPARKIAPALAAGCTCIIKPAEETP
GTTLEMARALTDAGLPKGVLNVVFGVPAEVSEYLIRSPIIRKISFTGSTPVGRHLARLAG
ETLTLATMELGGHAPVIVAKDADVQRAAELSMAIKLRNTGQVCTSPTRFFVERPIYEEYL
EHARAFVGKQVVGDGLQPATTVGPVANARRVAAMDDLIADALSHQARLVTGGERLKAPGL
MYGPTILADIPDHARAMTDEPFGPLALVQPVDDIEQGLARANALPYGLAGYAFTSSAATA
NRIAEQLEVGVIGINQMVVTIPETPFGGIGDSGWGREGGIEGLESYTIRKYVGHLHV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgaagctcgcactcctgatcgatggagaatggatcgaagaaaccagcgctgga
agcgaagttgtcctcaaccccgctacagaacaacctctcggcacgctgccgcatgctggg
aagcctgagctcgatcgcgcactcgcggcagcaagccgatcttttgaaagttggaagcgg
acgtcaccgttcgagcgtggtcaaatcttgcgccgcgccgccaatctcatgcgtgagcgg
gttgatcggattgcaacagttctgaccttggaagaagggaaaacgctgcccgaggcgaaa
ggcgagatcatcgcttcagccgagttcttcgattggttcgcagaagagggccggcgcagc
tatgggcgtgtcatcccggcccgtcttgccgatatgcgtcagacggttacacaggagcct
gttggcccggtcgcttgcttcacgccgtggaactttccggcggtaactcccgctcgcaag
attgcgccagccctcgctgctggatgcacctgcattattaagcccgccgaagaaacgcca
ggtaccacactggaaatggcgcgcgcactcacggacgcagggctgcccaaaggcgtgctg
aacgtagtcttcggtgtaccagcagaggtctccgagtatcttattcgctcaccgatcatt
cgcaagatctcctttaccggatcgactccagtgggccgccatctcgctcgcctggcaggt
gagacccttacgctcgcaacaatggagttgggcggccatgctcccgtgatcgtcgcgaaa
gacgccgatgtgcagcgcgccgcggagctctccatggcgatcaagctgcgcaacaccgga
caggtgtgcacctcgccgacacggttttttgttgaacgcccgatctacgaagaatatctc
gagcacgcgcgcgcctttgtgggaaaacaggtggtcggtgatggcttacaaccggccacc
acggttgggcctgtcgccaacgcccggcgtgtcgccgccatggacgacctgatcgctgac
gccttgtctcatcaggcgcggcttgtcaccggaggcgaacgcctcaaggcgcctggcctc
atgtatgggccgaccattcttgccgacatccctgatcacgccagagcgatgactgacgaa
ccattcggtccgcttgcgctggtacaacctgttgatgacatagaacagggtctcgctcga
gcaaatgcattaccttatggtctggccggatacgccttcactagctcggcagcgactgcg
aaccgcattgcggagcaattggaggtcggcgtcatcggtatcaatcaaatggtggtgacc
atcccggagacccccttcggcggaatcggcgacagcggctggggccgagagggcggaatt
gagggactggagtcctacactatacgaaagtacgtcggccatctccacgtctag
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