Rhizobium etli bv. mimosae Mim1: REMIM1_PE00243
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Entry
REMIM1_PE00243 CDS
T02778
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
REMIM1_PE00243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rel02000
]
REMIM1_PE00243
Transporters [BR:
rel02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
REMIM1_PE00243
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Orbi_VP4
Motif
Other DBs
NCBI-ProteinID:
AGS25331
LinkDB
All DBs
Position
pRetMIM1e:269278..270330
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AA seq
350 aa
AA seq
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MGINAMIWRAIGVAGLAVSTFLPAQPAAAGEQLTIVSWGGNFQDAQRKAYFEPFAKDSGI
KVIEDQWNGEQAKIRAMVETNNVTWDVVVGGTTGALCAAGMLETIEWNKVGLDPEKFNGR
QECAVPANAAANIITYDKDQLPSGPTTIADFFDLKKFPGKRGLNKRPYINLEWALIADGV
AIDDVYKVLDTPEGVDRAFKKLDTIKENAVWWESGAQPAQLLADRQVVMTSAWNGRIYDA
VKNSGKNFAIMWDSQILSYDYFTIPKGTPHLDAAYRFIAFASAPKAQAEMAGLIPYAPGN
ADAAALVDPKVLPYLPSTPEHMAKALTYNEAFWAEKGDELNQRFTAWLAK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggggataaacgcgatgatttggcgcgcgataggcgtggctggcttggcagtgagtacg
tttttgcccgcgcagcctgctgccgcgggcgagcaactgacgatcgtctcctggggtggt
aactttcaggacgctcaacgcaaagcgtatttcgagcccttcgcaaaagacagcggaata
aaggtcatcgaagaccagtggaacggcgaacaggctaagattcgcgccatggtcgaaacc
aataacgtaacgtgggacgttgtcgtcggcggtacgaccggcgcactttgcgctgcagga
atgcttgagacaattgaatggaacaaggtcggcctcgatcccgaaaagttcaacggtcgg
caggaatgcgcggttcctgcgaacgcggctgctaatataatcacctatgacaaggaccag
cttcccagcgggccaaccactattgcggacttcttcgacctgaagaaatttcccggcaaa
cgcgggctgaacaagcgcccgtacatcaatctcgaatgggctctaattgctgatggtgta
gctatcgacgacgtctacaaggttcttgacacaccagaaggggttgatcgcgcctttaag
aagctcgatacgatcaaggagaacgctgtttggtgggaaagtggagcccagccggcgcaa
ctactcgccgaccgccaagtcgtcatgacgtcagcctggaacgggcgcatctatgatgcc
gtcaagaactcgggcaagaatttcgcgatcatgtgggattcgcagatcctgagctacgac
tatttcactattccgaaaggaaccccccatctggacgccgcctacaggttcatcgctttc
gcgagtgcaccgaaggcacaagctgagatggcgggtcttatcccctacgctcccggcaac
gcggacgcggccgcattggtcgatccaaaggtcctgccgtaccttccgagtacgcctgag
catatggccaaggccttgacctacaacgaggccttttgggccgaaaaaggcgatgagctg
aaccagcgctttaccgcctggcttgcgaagtag
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