Rhizobium etli bv. mimosae Mim1: REMIM1_PE00346
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Entry
REMIM1_PE00346 CDS
T02778
Symbol
nodI
Name
(GenBank) nodulation factor ABC transporter ATP-binding protein NodI
KO
K09695
lipooligosaccharide transport system ATP-binding protein
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
REMIM1_PE00346 (nodI)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rel02000
]
REMIM1_PE00346 (nodI)
Transporters [BR:
rel02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
REMIM1_PE00346 (nodI)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
SMC_N
AAA_22
AAA_29
AAA_23
AAA
Motif
Other DBs
NCBI-ProteinID:
AGS25433
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All DBs
Position
pRetMIM1e:complement(376548..377462)
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AA seq
304 aa
AA seq
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MSTVAIDLAGVSKTYEGKVVVDGLSFRVAAGECFGLLGPNGAGKSTIARMVLGMTSPDAG
EITVLGVPVPARARLARAGIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREVEAIIPSL
LEFARLESKAHARVSELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLR
SLLASGKTIILTTHFMEEAERLCDRLCVLEKGRKIAEGHPHALIEEQIGCQVIEIYGGNP
HELHSLISPYAQRTEVSGETLFCYAPDPERVRLQLRGHAGLRLLQRPPNLEDVFLRLTGR
EMEK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggtcgcaatcgatctcgccggggtaagcaagacatatgagggcaaggtagtt
gtcgacgggctgtcgttccgcgttgcggctggtgaatgcttcggcctgctggggccgaac
ggcgcgggcaaaagcacgatcgcacgcatggtcctcggcatgacttcgcctgatgcaggg
gagattacggtgctcggcgtgccggtgcctgctcgcgctcgcttggctcgcgcaggcatc
ggagtggtcccgcagttcgacaacctcgatcttgagttcactgtgcgcgaaaatctactc
gtgttcgggcgctacttcggcatgagcacgcgcgaagtcgaagcgataataccatcgctg
ctcgagttcgcccgccttgagagcaaggcgcatgcgcgcgtctcggaactgtccggcggc
atgaagcggcgcctgacgctggcgcgtgcgctgatcaacgatccgcagctgcttgtcatg
gacgaaccgaccaccggtcttgatccgcacgcgcgccacctgatttgggagcgcctgcgc
tcgcttttggcgagcggcaagacgattatcttgacgacccacttcatggaagaggccgag
cggttgtgcgatcggctgtgcgtgctcgaaaaaggccggaagatcgccgaaggccaccct
catgcgctgatcgaggagcagatcgggtgccaggtgatcgagatctatggcggcaatccg
catgaactgcattcgctcatcagtccgtatgcgcagcgcaccgaggtgagcggcgagact
ctcttttgttatgcacccgatccggagcgggtgcgcctgcaactgcgcgggcatgcggga
ttgcgccttctgcagcgtccgccgaatctggaggatgtttttttgcggctgaccgggcgc
gagatggagaaatga
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