Rhizobium etli bv. mimosae Mim1: REMIM1_PF00003
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Entry
REMIM1_PF00003 CDS
T02778
Symbol
oxyR
Name
(GenBank) transcriptional regulator OxyR
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rel03000
]
REMIM1_PF00003 (oxyR)
Transcription factors [BR:
rel03000
]
Prokaryotic type
Helix-turn-helix
LysR family
REMIM1_PF00003 (oxyR)
SSDB
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
HVO_A0261_N
DPBB_PEX6
Motif
Other DBs
NCBI-ProteinID:
AGS25675
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Position
pRetMIM1f:complement(2506..3420)
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AA seq
304 aa
AA seq
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MKNLTLKQLRYFEALARDGRFRRAADACAISQPALSMQIKELEQELGSELFERSAREVKL
TPFGQTFALRVRDILRAVDELGEFARAARDSFLTRLRIGIIPTIAPYLLPTVINDLNKSF
AGIQIEVRETQTGKLVHELAQGQLDMAIVALPVSEPSLTELELFREEFVLVRRHEDGDKP
VPEREALREMRLLLLEEGHCFRDQALSFCKVGPARPREIMEGSSLSTLVQMVGAGIGVTL
IPEMAVPVETRSAHVSISRFPSPQPSRTIGMVWRNSTPMAKQLQEVGEAVRRSAETMREQ
YGGG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttactctgaaacagctgcggtattttgaagctttggcaagggacggccga
tttcgccgtgccgccgatgcctgcgccatctcccagccggcgctttccatgcagatcaaa
gaacttgagcaggagttgggcagcgagctcttcgaacgcagcgcccgcgaggtgaagctc
actcccttcggccagacctttgcgctgcgcgttcgcgacatcctgcgcgccgtcgacgag
ctcggcgagtttgcccgcgccgcgcgcgacagcttcctcacgcgtctgcgcatcgggatc
atcccgacgatcgcgccctatctgctgcctactgttataaacgatcttaacaaaagcttc
gccggaattcagatcgaggtgcgcgaaacgcagacgggcaagctggttcatgaactggcg
cagggccagctcgatatggcgatcgtcgcgctgccggtgtctgaaccttcgctgaccgaa
ctcgagctgttcagggaagagttcgtgctggtccggcgccacgaggacggcgacaagccg
gtgcccgagcgcgaggcgctgcgcgaaatgcggctgctgctgctcgaagaggggcactgc
ttccgcgaccaggccctgtcattctgcaaggtcgggcctgcccgcccgcgggaaatcatg
gaaggcagttcgctctccacgctcgtccagatggtcggcgccggcatcggcgtcaccctg
atcccggaaatggccgttcccgtcgaaacgcgctcggcccacgtctcgatctcccgtttt
ccgtcgccgcagccgtcgagaaccatcggcatggtttggcgcaattccacgccgatggcc
aagcagttgcaggaggttggcgaggcggtgcgccggtcggcggagacgatgcgcgagcag
tatggcggcgggtga
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