Rhizobium etli bv. mimosae Mim1: REMIM1_PF00213
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Entry
REMIM1_PF00213 CDS
T02778
Symbol
fixK
Name
(GenBank) nitrogen fixation transcriptional regulator FixK
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rel03000
]
REMIM1_PF00213 (fixK)
Transcription factors [BR:
rel03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
REMIM1_PF00213 (fixK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
MarR
HTH_20
MarR_2
HTH_24
Sigma54_DBD
HTH_AsnC-type
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AGS25881
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Position
pRetMIM1f:complement(227802..228533)
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AA seq
243 aa
AA seq
DB search
MLMQNNHAFDNAEKTLEALHAGQSLSSLFVSSAAEAVAAGKAICWEGDKANHLFQVEEGV
VRLHRIIGEGRRVITAFHFAGDLIGASLQNDFLFTAEAVTECKIRRISRKSFHEEVARSN
ALGPAYISLLCQEAAAAHEQMVLLSKKNAEERLCSFIVKLARRRSPQPRQDLLRVPMNRQ
DIADHLGLTIETVSRTITKLASRNIVVPEGRHDLRIVNLARLVQLSGDADDFSEDSCHRV
NLH
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgcagaacaaccacgcgttcgacaatgccgagaagacgttagaagcccttcat
gccggccaatcgctgtcgtcgcttttcgtaagttcggccgccgaggccgtcgcggccggc
aaggcgatttgttgggagggcgacaaagccaaccatctcttccaggtggaagaaggcgtc
gtccgcctgcatcgcatcatcggcgaaggtcgccgggtgataaccgcatttcatttcgcc
ggcgatctcatcggcgcgtcgctgcaaaacgatttcctgttcacggccgaggctgtcacc
gaatgcaagatccgccggatatcgcgcaagagtttccacgaagaggtcgcccggtcgaac
gcgctcggcccggcctatatctcgctgctctgccaggaggcggccgccgcacatgagcag
atggtgctgctgtcgaagaagaatgccgaggagcgcctctgcagcttcatcgtcaagctt
gcacgccgccgcagcccgcagccgcgccaggacctgttgcgtgtccccatgaaccgccag
gacattgccgaccacctcggcctgaccatcgagaccgtgtcccgcacgatcacgaaactt
gcgtcgcgcaacatcgttgttcccgagggcaggcacgacctcaggatcgtcaatctcgcc
cggctggtgcagttgtctggcgacgctgatgatttttcggaggattcctgtcatagggtc
aacctgcactga
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