Rhizobium etli bv. mimosae Mim1: REMIM1_PF00349
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Entry
REMIM1_PF00349 CDS
T02778
Symbol
groEL-3
Name
(GenBank) chaperonin GroEL 3
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
REMIM1_PF00349 (groEL-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rel03019
]
REMIM1_PF00349 (groEL-3)
03110 Chaperones and folding catalysts [BR:
rel03110
]
REMIM1_PF00349 (groEL-3)
03029 Mitochondrial biogenesis [BR:
rel03029
]
REMIM1_PF00349 (groEL-3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rel04147
]
REMIM1_PF00349 (groEL-3)
Enzymes [BR:
rel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
REMIM1_PF00349 (groEL-3)
Messenger RNA biogenesis [BR:
rel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
REMIM1_PF00349 (groEL-3)
Chaperones and folding catalysts [BR:
rel03110
]
Heat shock proteins
HSP60 / Chaperonin
REMIM1_PF00349 (groEL-3)
Mitochondrial biogenesis [BR:
rel03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
REMIM1_PF00349 (groEL-3)
Exosome [BR:
rel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
REMIM1_PF00349 (groEL-3)
Exosomal proteins of other body fluids (saliva and urine)
REMIM1_PF00349 (groEL-3)
Exosomal proteins of breast cancer cells
REMIM1_PF00349 (groEL-3)
Exosomal proteins of colorectal cancer cells
REMIM1_PF00349 (groEL-3)
Exosomal proteins of bladder cancer cells
REMIM1_PF00349 (groEL-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGS26016
LinkDB
All DBs
Position
pRetMIM1f:367717..369345
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVKFSTDARQRLLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEI
ELEDKFENLGAQLLREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGLNPQDLKRGI
DIAAAEAIRSIKERARKVASSDEVAQVGTISANGEGEIGKIIAEAVQRVGNEGVITVEEA
KSFETELDVVEGLQFERGYLSPYFVTNADKLIVEYEDAYILIHEKKLASLQPLLPLLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKALLEDIAIVTGGEV
ISEDLGIKLENVTLNQLGRAKKVRIDKESTTVVDGAGAKGEIDARVQQIKAQIEETSSDY
DREKLQERVAKLAGGVAVIRVGGSTEIEVKEKKDRVDDALNATRAAIEEGIVPGGGVALL
RAKTKIEALKNDNPDIQAGIHILLKALEAPIRQIAENAGVEGSIVVGKVLENSSPTFGFN
AQSEKYVDLLEEGIVDPAKVVRTALQDAASVAGLLVTTEALIAELPKDKPALPAAPGGGF
DY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagtcaaattctcaaccgatgcacgccagcggctgctgcgcggcgtc
gacattctcgccgatgccgtcaaggtgacgctcggcccgaagggtcgcaacgtcgtcatc
gaaaagtcattcggtgcgcctcgcatcaccaaggacggcgtatcggtggcaaaggagatc
gagctcgaggacaagttcgaaaatctcggtgcccagctgttgcgggaagtcgcttccaag
accaacgaccttgcgggcgacggcacgaccacggcgaccgtgcttgcccaagcgatcgtc
cgtgagggcgcgaaagcggtcgcagcggggctgaacccacaggacttgaagcgcggcatc
gacattgcggccgcggaagccatccgcagcatcaaggaacgtgcccgcaaggtcgcctct
tccgacgaggtcgcgcaggtcggcacgatctcggcaaatggcgaaggcgaaatcggcaag
atcatcgccgaggctgttcagagggtcggcaatgaaggcgtcatcaccgtcgaggaggcc
aagagcttcgagacggaactggacgtggtcgaaggcctgcagttcgaaaggggttatctc
agcccctatttcgtcaccaatgccgacaagctgatcgtcgaatatgaggatgcctacatc
ctcatccacgaaaagaaacttgcctcgctccagccgcttctgccgttgctcgaggctgtc
gtgcagaccggcaagccgctcctgatcatcgccgaggatgtcgaaggcgaggcgctggcg
acgctcgtcgttaacaagctgcgcggcggcctgaagattgctgccgtcaaggcgccgggt
ttcggcgaccgccgcaaggcgctcctggaggatatcgccatcgtcacaggcggcgaggtg
atctccgaagatctcggcatcaagctcgagaacgtcacgctgaatcagcttggccgcgcc
aagaaggtccgcatcgataaggaaagcacgacggtcgtcgacggcgccggagcgaagggc
gaaatcgacgctcgcgttcagcagatcaaggcgcagatcgaggaaacctcctccgactac
gatcgcgagaagctgcaggaacgggttgccaagctcgctggcggtgttgccgtcatccgg
gttgggggctctaccgaaatcgaggtcaaggagaagaaggatcgtgtcgacgacgcgctg
aatgcgacgcgtgcggcgatcgaagaaggcatcgtgccgggcggcggcgtggcgcttctt
cgggcaaagaccaagatcgaggccctgaagaacgacaatcccgatattcaggccggcatt
catattctgctgaaggcgcttgaggcgccgatccgccagatcgccgaaaacgccggcgtc
gaaggctcgatcgtcgtcgggaaggtgctggagaacagctcgccgacctttggcttcaac
gcccagtcggagaagtatgtcgatcttctcgaggaaggcatcgtcgatcccgccaaggtg
gtgcgcaccgcgctgcaggatgccgcctccgtcgccggtcttcttgtgacaaccgaggcg
ctcatcgccgaattgcccaaggacaagccggcgcttccggctgcaccgggcggcggcttc
gactactga
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