Rhizobium etli bv. mimosae Mim1: REMIM1_PF00569
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Entry
REMIM1_PF00569 CDS
T02778
Name
(GenBank) LacI family transcription regulator protein
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rel03000
]
REMIM1_PF00569
Transcription factors [BR:
rel03000
]
Prokaryotic type
Helix-turn-helix
LacI family
REMIM1_PF00569
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_31
HTH_3
HTH_IclR
HTH_Tnp_ISL3
Sigma54_DBD
Sigma70_r4
Xre-like-HTH
HTH_6
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AGS26234
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All DBs
Position
pRetMIM1f:610821..611819
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AA seq
332 aa
AA seq
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MEFKHQATVTLAEVAEAAGVGESTVSRVLRNHGSFSGKTRERVMAAVERLGYVPNRIAGT
LASTTSRLVAFVIPSLSNIVFADVLRGAGAVLEENRYQAVFSVTDYDPSKEEALAAAMLA
WRPAAVMLAGYEHTDGTAKMLRASGCRVVELLDLDGDAIDIAVGFSNRAAGRESAAFLLK
RGYRRIGYVGHDLSRDIRAGKRFASFCEILEANGTPLVAREILAGASSVENGRLALERLL
ARASDLDAVYFSNDDMALGGYFHCLAQGIVIPSQLALFGYNGLDIGRAIPQPLSTIRTPR
VATGQMAAELVVANAPPQAIDLGFELIEGATA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaattcaaacatcaggcgacggtaacccttgcagaggtcgcagaagcggccggcgtc
ggggagagcacggtgtcgcgtgtcctgcgcaaccatggttcgttttcgggcaagacacgg
gagcgggtgatggccgccgtggaacggctgggctatgtgccgaaccgcatcgccggaacg
ctcgcttccaccacgtcacgccttgtcgccttcgtcattccctccctgtccaacatcgtc
tttgccgacgtgctgcgcggtgccggcgctgtcctggaggaaaaccgatatcaggcggtc
ttctcggtgaccgattatgatccgagcaaggaggaggcgctcgccgctgcgatgcttgcc
tggcggccggcagcggtgatgctggcgggatatgagcataccgacggcacggcgaagatg
ctgcgcgccagcggttgccgggtggtggaattgcttgatctcgacggcgatgcgatcgat
atcgcggtcggtttctcgaaccgtgcggccgggcgggagagcgcggcattcctgctcaag
cgaggctatcgccggatcggctatgtcggccacgatctcagccgcgacatccgcgccggc
aagcgctttgccagcttttgcgaaattctcgaagccaacggcacgccccttgtcgcccgc
gaaattctggcgggcgcttcgtcggtggagaacggcaggctggcgctggagcgactgctt
gcacgagcgagcgatctcgatgcggtctatttttccaacgacgacatggcgctcggcggt
tattttcactgtctcgcccaaggaattgtcattccctcgcagctggctctttttggctat
aacggtctcgatatcggccgggcgataccgcagcccttgtcgaccatccggacgccgcgc
gtcgcgacggggcagatggccgccgagctggttgtcgccaacgcgccgccgcaggctatc
gacctcggttttgaactgatcgaaggggcgactgcgtaa
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