Rhizobium etli bv. mimosae Mim1: REMIM1_PF00816
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Entry
REMIM1_PF00816 CDS
T02778
Symbol
lpdA-2
Name
(GenBank) dihydrolipoamide dehydrogenase 2
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00010
Glycolysis / Gluconeogenesis
rel00020
Citrate cycle (TCA cycle)
rel00260
Glycine, serine and threonine metabolism
rel00280
Valine, leucine and isoleucine degradation
rel00310
Lysine degradation
rel00380
Tryptophan metabolism
rel00620
Pyruvate metabolism
rel00630
Glyoxylate and dicarboxylate metabolism
rel00640
Propanoate metabolism
rel00670
One carbon pool by folate
rel00785
Lipoic acid metabolism
rel01100
Metabolic pathways
rel01110
Biosynthesis of secondary metabolites
rel01120
Microbial metabolism in diverse environments
rel01200
Carbon metabolism
rel01210
2-Oxocarboxylic acid metabolism
rel01240
Biosynthesis of cofactors
Module
rel_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rel_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rel_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rel_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
REMIM1_PF00816 (lpdA-2)
00020 Citrate cycle (TCA cycle)
REMIM1_PF00816 (lpdA-2)
00620 Pyruvate metabolism
REMIM1_PF00816 (lpdA-2)
00630 Glyoxylate and dicarboxylate metabolism
REMIM1_PF00816 (lpdA-2)
00640 Propanoate metabolism
REMIM1_PF00816 (lpdA-2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
REMIM1_PF00816 (lpdA-2)
00280 Valine, leucine and isoleucine degradation
REMIM1_PF00816 (lpdA-2)
00310 Lysine degradation
REMIM1_PF00816 (lpdA-2)
00380 Tryptophan metabolism
REMIM1_PF00816 (lpdA-2)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
REMIM1_PF00816 (lpdA-2)
00670 One carbon pool by folate
REMIM1_PF00816 (lpdA-2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rel04147
]
REMIM1_PF00816 (lpdA-2)
Enzymes [BR:
rel01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
REMIM1_PF00816 (lpdA-2)
Exosome [BR:
rel04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
REMIM1_PF00816 (lpdA-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
FAD_binding_3
HI0933_like
NAD_binding_8
GIDA
DAO
Thi4
Lys_Orn_oxgnase
Amino_oxidase
AlaDh_PNT_C
2-Hacid_dh_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AGS26479
LinkDB
All DBs
Position
pRetMIM1f:complement(871791..873230)
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AA seq
479 aa
AA seq
DB search
MSYDVIIIGSGPGGYVAAIRASQLGLKTAIVEREHMGGICLNWGCIPTKALLRSAEVLDH
ANHFKDFGLVLEGSVKPDAKAVVGRSRAVSARLNAGVGFLMKKNKIDIIWGEAKLTKPGE
IVVGKSSKPVVEPQHPLPKNVKGEGTYTAKHIIIATGARPRALPGIEPDGKLIWTYFEAL
KPDALPKSLIVMGSGAIGIEFASFYRSMGVDVTVVEVMPTIMPVEDAEITAIARKQLEKR
GLKIFTSAKVTKVEKGAGSITAHVETSDGKVQQITADRMISAVGVQGNIENLGLEALGVK
TDRGCVVADGYGKTNVAGIYAIGDVAGPPMLAHKAEHEGVVCVEKIAGLPNVHPTDKGKV
PGCTYCNPQVASVGLTEAKAKELGRDIRVGRFSFAANGKAIALGEDQGMVKVIFDKKTGE
LLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSETMKEAVLDAYGRVLNA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacgacgtcatcatcatcggttccggtcccggcggctatgtcgccgccatccgc
gccagccagctcggcctgaagacggcgatcgtcgagcgtgagcatatgggcggcatctgc
ctgaactggggttgcatcccgaccaaggcgctgctgcgctcggccgaggtgctcgaccat
gccaaccacttcaaggatttcggccttgtcctcgaaggttcggtgaagccggacgccaag
gccgtcgtcggccgctcgcgcgccgtctccgcccgtctgaatgccggcgtcggcttcctg
atgaagaagaacaagatcgacatcatctggggcgaggcgaagttgacgaagcccggcgag
atcgtcgtcggcaagtcgtcgaagccggtcgtcgagccgcagcacccgctgccgaagaac
gtcaagggcgagggcacctataccgccaagcacatcatcatcgccaccggcgcccgtccg
cgtgcgctgccgggtatcgagccggatggcaagctgatctggacctatttcgaggcgctg
aagccggatgcactgccgaagtcgctgatcgtcatgggctcgggcgcgatcggcatcgaa
ttcgccagcttctaccgctcgatgggcgtcgacgtcacggttgtggaagtcatgccgacg
atcatgccggtcgaggatgccgaaatcaccgccatcgcccgcaagcagctggaaaagcgc
ggcctgaagatcttcaccagcgccaaggtcaccaaggtggagaagggtgccggcagcatc
accgcccatgtcgagacgtcagacggcaaggtccagcagatcaccgccgaccggatgatt
tcggccgtcggcgttcagggcaatatcgaaaatctcggcctcgaggcgctcggcgtcaag
actgaccgcggctgcgtcgtcgccgacggttacggcaagaccaatgtcgccggcatctat
gcaatcggcgacgtcgccggcccgccaatgctggcgcacaaggccgagcatgagggtgtc
gtctgcgtcgagaagatcgccggcctgccgaatgttcatcccaccgacaagggtaaggtc
ccgggctgcacctattgcaatccgcaggtcgcttccgtcggtctcaccgaagctaaggcc
aaggagctgggccgcgatatccgcgtcggccgcttctccttcgccgccaacggcaaggcg
atcgcgcttggcgaagatcagggcatggtgaaggtgatcttcgacaaaaagaccggcgag
ctgctcggcgcccatatggtcggcgccgaagtcacggaactcatccagggcttcgtcgtc
gcgatgaacctcgaaacaaccgaggaagagctgatgcatacgatcttcccgcatccgacc
gtgtccgagacgatgaaggaagcggtgctcgatgcttatggtcgtgtgctgaacgcttga
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