Rhizobium etli bv. mimosae Mim1: REMIM1_PF00897
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Entry
REMIM1_PF00897 CDS
T02778
Name
(GenBank) long-chain-fatty-acid--CoA ligase protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00061
Fatty acid biosynthesis
rel00071
Fatty acid degradation
rel01100
Metabolic pathways
rel01212
Fatty acid metabolism
rel02024
Quorum sensing
rel04146
Peroxisome
Module
rel_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
REMIM1_PF00897
00071 Fatty acid degradation
REMIM1_PF00897
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
REMIM1_PF00897
09145 Cellular community - prokaryotes
02024 Quorum sensing
REMIM1_PF00897
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rel01004
]
REMIM1_PF00897
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rel04147
]
REMIM1_PF00897
Enzymes [BR:
rel01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
REMIM1_PF00897
Lipid biosynthesis proteins [BR:
rel01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
REMIM1_PF00897
Exosome [BR:
rel04147
]
Exosomal proteins
Exosomal proteins of breast milk
REMIM1_PF00897
Exosomal proteins of breast cancer cells
REMIM1_PF00897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AGS26559
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All DBs
Position
pRetMIM1f:complement(963290..964801)
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AA seq
503 aa
AA seq
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MWLADILFESASRHGDRLAIIFEDRRLTYNALLTEVERAAGNLQALGIGPSKRVAVMLEN
GLDFVVAYYATLATGASVVTVSALLTAPEASYVLSDSRADLLISGGRVWDTACAVAQGMG
LRSLQTAELSADLPYFCPAPPDGRDEAVIMYTSGTTGKPKGAVLTHDNLTMNAWVSAGQG
MFKLTPDDVLLCCIPLFHASGQSCLMNTGLLAGATVVIMRQFAAQAVLDIMRRERVTFFL
GVPTMYVGLLGLVRPNKAELPHWRMAVSGGAPIPVAVLREVERLFEVDIYEGYGLTETSP
TSCFNQPDFERRPGTIGKAIWGVDVEIAKIEVEDRIELLPAGEVGELVVRGHNVFAGYLN
NPDATRTSMIDGWFRTGDIATKDDDGYVRIVDRKKDMIIRGGFNVYSREVEEVLSTHPAI
ALAAVIGRPDEVFGEEIVAVVQLHPDIPPMSSAEMVEWAKANLAKYKYPREFIFVEQVPL
GSGGKILKRELAEMVARLSSAPP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgctgacatcctttttgaatctgcgtcccggcacggcgacaggctggcgatc
attttcgaagatcgccgcctgacctacaacgccttgctcacggaggttgagcgcgcggcg
ggcaatctgcaagcacttggtatcggtccatcgaagcgcgttgccgtaatgctcgaaaac
ggtttagatttcgtcgtcgcttattatgcgacgcttgccacgggcgcctcggttgtgact
gttagcgcgctattgaccgcgccggaggccagctatgtcctaagcgacagtagagccgac
cttttgatcagcggcggccgggtttgggatacggcatgtgcggtcgcgcagggcatggga
ttgcgatcgttgcaaactgcagaactttccgccgaccttccctatttttgtcccgcgcca
cccgacggtcgcgatgaggccgtcataatgtacaccagtgggacgaccggcaagccgaag
ggggctgttcttacccatgacaatctgacgatgaacgcatgggtttcggcggggcaaggt
atgttcaagctaacccccgatgatgtcctgctttgctgcataccgctttttcatgcctcc
ggccaaagctgcctcatgaataccggtcttctggctggtgcaacagtggtgatcatgcgg
cagttcgcggcgcaagccgtcctggacatcatgaggcgggaaagggtgacgttttttctt
ggcgttccgacgatgtatgttgggctgctggggcttgtccggccgaacaaggcggaattg
ccgcattggcgcatggcggtgtcgggcggagcgcccattcctgttgccgtgctgcgcgag
gtcgaacgcctgttcgaggtcgatatttacgagggctacggtcttacggagacttcgccc
acttcctgcttcaaccagcccgatttcgagcgacgccccggaacaatcggcaaggctatt
tggggtgtcgacgttgagatcgccaagatcgaagtggaggaccgcatagaactgctgccg
gccggcgaagtgggcgagttggtggtacgcggccataatgttttcgccggatatctgaac
aatccggatgcgacacggacgtccatgattgatggctggttccgaaccggtgacatcgcg
accaaggacgatgatggctatgtcaggattgtcgaccgcaagaaagatatgatcatacgg
ggcggatttaacgtctactcacgcgaggtcgaggaggtgctctcgacccatcccgccatt
gccttggctgcggtcatcgggcgcccagatgaggtctttggtgaggaaatcgtcgccgtc
gtacaactccatcctgatataccgcctatgtcatccgccgaaatggtggagtgggccaaa
gctaatttggcgaaatacaaatatccgcgggaatttatattcgttgaacaggtacctttg
ggatctggtggaaagatactcaagcgagaattggcggaaatggtggcgcggctttcgagc
gctccgccatga
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