Rickettsia endosymbiont of Culicoides impunctatus: LF885_00320
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Entry
LF885_00320 CDS
T10695
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rem03400
]
LF885_00320 (radA)
DNA repair and recombination proteins [BR:
rem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LF885_00320 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
RecA
AAA_22
AAA_24
SLFN-g3_helicase
AAA_16
nSTAND3
Lon_C
AAA_19
AAA_14
NACHT
AAA
DUF7125
Motif
Other DBs
NCBI-ProteinID:
UCM85760
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Position
complement(62469..63803)
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AA seq
444 aa
AA seq
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MSKIKKQYICTNCGNSSLKWAGQCFDCGLWGGIEEEIISQIQVKLGNKQEIQKLDGVVVD
SLRIPTPIKELNRVLGGGLVCSSAILIGGDPGIGKSTLLLHLVATSSCVTMKCCLYVTGE
ESIDQIKLRALRLGLTNKTTSILAATSIEDIISTIDADKNNIDLVVIDSIQTMVTRTLSS
PPGTISQIRACANELVSYAKHNNIIILLSCHVTKDGQLAGPKLLEHLVDTVLYFEGDHNS
HFRILRSIKNRFGGVGEIGVFEMTASGLIEVSSPSELFLMKRDKNVSGTTVFAGIEGSRP
LLIEIQALIAPSNIPMPRRSVVGWDLNRLAMIIAVLNVRFGLNLSSHEVYLSVAGGLKIS
DPASDLAVAAALISAAKNKAVPEHSIFFGEIGLSGEIRKVTAAEVRIKEATKLGFNKLIC
SKLEKLSSNLICPISNLKELKELI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaattaaaaaacaatatatatgcacaaattgtggtaatagctcccttaaatgg
gctgggcaatgttttgattgtggcttatggggaggaattgaagaagagataattagtcaa
atacaagttaagttaggtaataaacaagaaatacaaaagctggatggggtggtagtggat
tcgttacgtatccctacgcctataaaggaattaaatagggtgctgggaggcgggttggta
tgctcttctgcaattttaattggcggtgaccctggaattgggaaatcaactttattatta
cacttagtggcaacctcctcttgtgttacaatgaagtgctgtctgtatgtaactggagag
gaatctattgaccaaataaaactccgagctttaagattaggacttactaataaaacaacc
tccatcttagccgccactagcattgaagatattatctcaactattgatgccgataagaac
aatattgatttggtagtgattgattcaattcaaacgatggtaactcgtacattatcatcc
ccccctggtactatttcccagattcgtgcctgtgctaatgaattagttagctatgctaaa
cataataatattattattttgcttagttgtcatgtgacaaaagatgggcaattagctggt
cctaagttacttgagcatctcgttgataccgtactatattttgagggtgatcataatagt
cattttcggattttacggtctattaaaaataggtttggtggagtaggagaaattggtgtt
tttgaaatgactgctagcggtcttattgaagtctccagcccttctgaattatttctgatg
aaaagagataaaaacgttagcggtacaacagtatttgctggaatcgaaggatcaagacct
ttattaattgaaatccaagcattaattgctccgtcaaatataccaatgccaagacgttca
gttgtaggctgggatttgaataggctagcaatgataatagctgtattaaatgtacgattt
ggtcttaatttatcttctcatgaggtatatttgagcgttgctggcgggcttaaaatttca
gacccagcttcagacttagctgttgcagcggctttaatttctgccgcaaaaaataaagct
gtgccagaacatagtattttctttggagaaattggtttatctggtgaaataaggaaagta
actgcagcagaagtcagaataaaagaagcaacaaaattaggattcaataaattaatttgc
tccaaacttgaaaaactgagtagtaacctaatttgtccaattagtaatctaaaggaatta
aaggagttaatataa
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