Rickettsia endosymbiont of Culicoides impunctatus: LF885_00355
Help
Entry
LF885_00355 CDS
T10695
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Pathway
rem03410
Base excision repair
rem03430
Mismatch repair
rem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF885_00355 (recJ)
03430 Mismatch repair
LF885_00355 (recJ)
03440 Homologous recombination
LF885_00355 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rem03400
]
LF885_00355 (recJ)
DNA repair and recombination proteins [BR:
rem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LF885_00355 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LF885_00355 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LF885_00355 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UCM85765
LinkDB
All DBs
Position
complement(72591..74384)
Genome browser
AA seq
597 aa
AA seq
DB search
MSISLEPKCSVNGKIWQQRLVNEDGVLELCRSVGISDFLARVLSPRLENLVQVTDFLSPK
LKNLLPDPFHLLDMHKAVDRAIEAIINKQKICIFADYDVDGATSSSLLKNLFRDLGQNVD
IYVPDRIAEGYGPTPAAMQKIKDNGTKLLITVDCGAMAHEALKHAALVGLDVIVIDHHIS
SDILPEAVAVVNPNRIDETSDYKYLAAVGVSFLFATALLSDLKKQNFFANHHDISGRDDI
TIPNLMQYLDLVALGTVCDVMKLVHLNRAFVTQGLKILQQRKNLGMTTLCDIAGLNEKPN
CYHLGFVLGPRINAGGRVGKSSLGANLLSTECPIEANRLAQELEKHNNERKVIELMMIEE
STQIALTQENDSSLFIIGKGWHPGVIGIVAGRLKEKFNKPVSVIALNDGIGKASCRSIKN
VDFGSKIINAKTKELIVVGGGHSMAAGFTVLEEKLLELQEFLNHAFKSDMNNHNDLTGEE
YDAELTTSSVNLLLMDELSKLEPFGQGNPDPIFKFSNLFVLKADIVGGKHIKCLLAPSKE
VFGSKALAAIAFNAVSSPIENILLNVKSYNISVIGSLKVNSWQERHTIQLQIKDLII
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatatcactagaacctaaatgttcagtaaatggcaaaatttggcagcagcgatta
gtcaacgaggatggtgttctagagctttgtcgttctgtaggaattagtgattttttagct
agggttctatctccccgtctagagaatttggtgcaagttactgattttctatcacctaaa
cttaagaacctactgccagatccttttcatttacttgatatgcacaaggcagtagataga
gctatagaagccattataaataaacaaaaaatctgcatatttgctgattatgatgttgat
ggggctacttcttcatcattgcttaagaatctatttagggatttggggcagaatgttgat
atttatgttccagaccgaattgctgaaggatatggaccaaccccagctgctatgcaaaaa
attaaggataatggaactaagctgcttattactgtagattgcggagcaatggcacatgag
gctctgaaacatgcagcactagtagggcttgatgtgatagtgatcgatcatcacattagt
agcgatatattacctgaggctgttgccgttgttaatccaaatcgtattgatgaaaccagc
gattataagtatctggctgctgtaggagtatcatttttatttgctactgccttattatct
gatttaaaaaaacaaaatttctttgccaatcatcatgacattagtggtagggatgatatt
actatacctaacttaatgcagtatttagatttagttgcccttggtacggtatgcgatgta
atgaagcttgttcacttaaatcgtgcttttgttactcaaggattaaaaatccttcagcaa
agaaaaaatttaggtatgacaaccttatgcgatattgctggcttaaatgaaaaaccaaac
tgttatcatttgggatttgtcttgggacctaggattaatgctgggggaagagttggtaaa
tcatcattaggggctaatcttttatctaccgaatgtccaatagaagcaaatagattagca
caggagttggagaaacataataatgagcggaaagtaatagaactgatgatgatagaggaa
tctactcaaatagctttaactcaggaaaatgatagctcattatttataattggtaaagga
tggcatccgggtgtgattggtattgtcgctggaagattaaaagaaaaatttaataaaccg
gtgtcagttatagctttaaatgatggaataggtaaggcttcttgtcgttctatcaaaaat
gttgattttggtagtaaaattatcaacgccaaaactaaagagttaattgtagttggcggg
gggcattcaatggctgctggatttacagtattagaagaaaaattactagagttgcaagaa
ttcttaaatcacgcctttaagagtgatatgaataatcataatgaccttacaggcgaagaa
tatgatgctgagctcactactagtagtgtaaatttgctgttaatggatgagctaagtaaa
cttgagccatttggtcagggaaatcctgacccaatatttaaattctctaatctttttgtt
ttgaaagctgacatagttggtggtaaacatataaaatgtttgctagccccttctaaggaa
gtgtttggctctaaagcccttgctgctattgcttttaatgccgtgtctagtccgatagag
aatatattgcttaatgttaagtcttataatatttccgtgattgggtcattaaaagtcaat
agctggcaagaacgtcatactatacaattacaaataaaggacttgataatatga
DBGET
integrated database retrieval system
