Rickettsia endosymbiont of Culicoides impunctatus: LF885_00465
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Entry
LF885_00465 CDS
T10695
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LF885_00465 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rem03019
]
LF885_00465 (rnc)
03009 Ribosome biogenesis [BR:
rem03009
]
LF885_00465 (rnc)
03036 Chromosome and associated proteins [BR:
rem03036
]
LF885_00465 (rnc)
Enzymes [BR:
rem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LF885_00465 (rnc)
Messenger RNA biogenesis [BR:
rem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LF885_00465 (rnc)
Ribosome biogenesis [BR:
rem03009
]
Eukaryotic type
90S particles
RNase
LF885_00465 (rnc)
Prokaryotic type
rRNA processing factors
LF885_00465 (rnc)
Chromosome and associated proteins [BR:
rem03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LF885_00465 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
INT_SG_DDX_CT_C
Motif
Other DBs
NCBI-ProteinID:
UCM85786
LinkDB
All DBs
Position
complement(93565..94275)
Genome browser
AA seq
236 aa
AA seq
DB search
MITNKESALSTPEKLEQDIGYNFNNKDFLLEALSHPSLKQHTVKHGVQKNYERLELLGDT
IINFVITEILFKNFSTYDEGKLAKIRAYLVCKELLCKVATKINLSDYIIMTYGEELLGGR
QNPNNIENTMEALIAAIYLDSNIDAVKKIVNDLWYEFIDIIDLADYDPKSTLQELAQKKG
TKKPVYQVIKREGSPHSSIFTVLVQMDEYQQTGTGHSVKEAEKVAARKLMNYLNNL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaaataaagaatcagcactctctactccggaaaaacttgagcaagatataggg
tataattttaataataaagattttttactagaagcgttaagccacccttctctaaaacag
cataccgtaaagcatggagtccaaaagaattacgaacgtttagaattacttggtgataca
ataattaattttgttattactgaaattctatttaaaaatttctctacttatgatgagggg
aaattagcaaaaattagagcttatctagtctgtaaagaattactttgtaaagtagctacc
aaaatcaatctgtcagactatattattatgacttatggcgaagaactattagggggaagg
caaaatcctaataatatcgaaaatactatggaggcattaattgctgccatttatcttgat
agcaatattgacgcagtaaaaaaaatagtaaatgatttgtggtatgagtttatagatatt
attgatttagctgattatgaccctaaaagtacccttcaggaattagctcagaaaaaaggg
actaaaaagcctgtatatcaagtgattaaaagagaaggttctccacattcatccatcttc
actgtattagtacagatggatgaatatcaacaaactggtactggtcactcagttaaggaa
gcagaaaaagtcgctgctcgtaaattaatgaattacctcaacaatttgtaa
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