Rickettsia endosymbiont of Culicoides impunctatus: LF885_02515
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Entry
LF885_02515 CDS
T10695
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rem03400
]
LF885_02515
Enzymes [BR:
rem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF885_02515
DNA repair and recombination proteins [BR:
rem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LF885_02515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UCM86122
LinkDB
All DBs
Position
complement(510404..513409)
Genome browser
AA seq
1001 aa
AA seq
DB search
MNLYRINPSSSFLDILADFILDNFSEKNSISNLKVILPSGFACWNLQNILINKQHIAILP
NIIPWSNIMAEGEEIFAIASENLQPITFLQERTILAEIIHNYCELQFSITQSLQFCSTIS
ELFYQLACNNLSIDSVNEIEKINPSQHWSVIYQFLKYAHSEWQEKIKLLRKQDRLNYQVT
MMDAEIARLKRADTSLIVAGIVGHNPISWNFLKNVANSPDSFIILPPISTCHSRVGGNLD
IAPKQDDMINVNQAIVNSGKFDYIVNSGEVDARSDGATPISNRRALSDDVTNFSSIDYNY
NHEEDCLYNFKKLLTVLDKNLSDFHPLGNHHPEYLIFDKIIFDDIADAPQQLYLNQKSIA
VDHIKYFELEDIFQEAEQISLICQQSSDKKIAIIVNNQTTKNFYCNFLTKYSLEFQDLLG
NNLSETLISSLIIAISEILCNDFDIKKLFLLLKNPLINCKLVQRLELLMSGKNRFIRQSD
QMLALVEKTNDNELIEWSKKLINLLYSNSGNNFAKILKSSISIAEKLYRDIWHEQSAAEL
SNFLSELINTNCNLTLDNKKDFPKLLKGLMSNCKYFAHNNYSKNIIIGKAEDLILLKFDL
VILTDFNQGCWSSSSSISQWINEQTLKKLHMVVGTSIDQYYFYLFLHNAQVIITRSKRQD
GKSGLLPSNLLLKLQLIAQQNLLHQSLIAENCLTSTLCHSSNPSCHSRVGGNLYPALKQD
DIISSLTDNNLLWENTNVCSPIFPDTISVTDIEMLIRNPYSFYAKKILNVRSRDRVGQEP
KISEFGSFVHKVLEQYSKNYNKLENNKIGLILDISNNLLQDVILPTYTQKIWQIKFMPIA
ESFVEFDEQRRNGCKYIYSETRGAISLNIAGQELTIIGVADRIEIDEFGAAVIIDYKTGS
LPSRKDIETGLSPQLIIEALMLQEGGFGIEVNNVKQVSYVKISSSKPIIQILEIDLTREE
LAGHKQGMIRLLEYYIMNKSFSYDIDLLKHDDYAHLARRDG
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctatagaatcaacccatcttcatcatttttagatatattagctgattttatc
ttagataatttcagtgagaagaattctattagcaatcttaaggttatattgccgagtggt
tttgcttgttggaatttacaaaatattttgattaacaaacagcatattgcgattttgcca
aatattattccttggtctaatattatggctgaaggtgaagaaatttttgctatcgcatca
gaaaatttacagccgataacgtttttgcaagaaagaactatcctagctgaaatcattcat
aattattgtgagttacaatttagcataacacaatctttacaattttgttcaacaatatct
gagttattttaccagctagcttgtaataatttatcgatagattcggtaaatgaaatagaa
aaaattaatccatcgcaacattggagtgttatttatcaatttcttaaatacgcccattct
gaatggcaagagaagataaaattgttaagaaagcaagatcggctaaattatcaggtcact
atgatggatgcagagatagcaaggctgaaaagagctgatactagtttgatagtagccggt
atagtagggcataatcccatatcatggaatttcttaaagaatgttgctaattcaccggat
agttttataattttaccgcctattagtacgtgtcattcccgcgtaggtgggaatctagat
atcgcaccgaagcaggatgacatgataaatgttaatcaggctatagtcaattcaggaaaa
ttcgactatatagtcaattcaggagaagttgatgctaggagcgatggagcgacgcctata
agtaataggcgagcattgagcgacgacgtcaccaacttctcatcaattgactataactat
aatcatgaagaagattgcttatataactttaaaaaattactaacagttctagataaaaat
ttatcagattttcatcctctaggtaatcatcatccagagtacttgattttcgataagata
atttttgatgatatagctgatgcacctcaacaattatacttaaatcagaagagtatagct
gtagatcatataaaatattttgagcttgaagatatttttcaagaggcagaacaaataagc
ctgatttgccaacaatctagtgataagaaaatagctattattgtcaataatcaaacaacc
aagaatttttattgtaattttttgaccaaatattccttagagttccaagatttgctaggt
aataatttatcagaaacgctaattagttctctaataattgccattagtgaaatattatgt
aatgattttgatataaaaaagttatttttactattaaagaatcctttgattaactgtaaa
ttagttcaaagattagaactgttaatgagcggcaaaaaccgttttatcaggcaatctgat
caaatgctggctctagtagaaaaaaccaatgataatgaattaatagaatggtctaagaag
ctaataaacttactttatagcaatagtggcaataattttgctaaaatattaaaatcctcg
attagcattgctgaaaaactttaccgagatatttggcatgagcagtcagctgctgaatta
tcaaattttttatcggagttaataaatactaattgtaatttaaccttagataataaaaaa
gattttccaaagttactgaagggtttaatgtctaattgtaagtattttgctcataataat
tattctaaaaatataattattggtaaagcagaagatttaatattgcttaaatttgattta
gtaattttaactgactttaatcaaggatgctggtcatcatcctcatctatcagccaatgg
attaatgagcaaacgttaaaaaaattacatatggttgttggaacttctatcgatcaatat
tatttttatttatttctgcataatgcccaagtaataattactagatcaaaaagacaggat
ggtaaatctggtttgttaccatcgaatttgttactaaaattgcaacttattgcacaacag
aacttgttgcatcaaagtttgattgcagaaaattgtttgacatcaaccctatgtcattcc
agcaatccttcctgtcattcccgcgtaggcgggaatctatatcccgcattgaagcaggat
gacatcatttcttcgctaacagacaacaatttactatgggaaaatactaatgtgtgtagc
cccatttttcctgatacaatatcggttactgatatagaaatgttaatacggaatccttat
agtttttacgctaagaagattttgaatgtcaggagtagagatagggtagggcaggagcct
aaaatatctgaatttggtagttttgttcataaggttttagagcaatattcgaaaaattat
aacaagttagagaataacaaaattggcttaatattggatattagtaataatcttttacaa
gatgttatcttaccaacctatacgcaaaaaatttggcaaataaaatttatgcctattgct
gagtcttttgttgaatttgatgaacaacgtagaaatggttgtaaatatatttattctgaa
actagaggagcaatttcattaaatattgctgggcaagaattaacaataattggagtggct
gatagaattgagatagatgagtttggggcagcggtcattatcgattataaaaccggtagc
ttaccgagtagaaaagatatagaaactgggttatccccgcagctaataattgaggcgtta
atgctacaagaaggtggttttggtatagaagttaataacgtaaaacaggttagttacgta
aaaatttctagctcgaagccaataatccaaattttagagatagatctcactagagaagaa
ttggctgggcataaacaaggtatgatacggttattggaatattatataatgaataaaagc
ttttcatatgatattgatttactaaaacatgatgactatgcgcacctggctaggagagac
gggtga
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