Rickettsia endosymbiont of Culicoides impunctatus: LF885_03905
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Entry
LF885_03905 CDS
T10695
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Pathway
rem00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LF885_03905 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rem01007
]
LF885_03905 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rem03016
]
LF885_03905 (aspS)
03029 Mitochondrial biogenesis [BR:
rem03029
]
LF885_03905 (aspS)
Enzymes [BR:
rem01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LF885_03905 (aspS)
Amino acid related enzymes [BR:
rem01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LF885_03905 (aspS)
Transfer RNA biogenesis [BR:
rem03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LF885_03905 (aspS)
Prokaryotic type
Other AARSs
LF885_03905 (aspS)
Mitochondrial biogenesis [BR:
rem03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LF885_03905 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UCM85162
LinkDB
All DBs
Position
812447..814261
Genome browser
AA seq
604 aa
AA seq
DB search
MHKYRTHNCNELRLSDVGKRVKLSGWVHRRRDHGNLVFIDLRDHFGISQLVFTDQDPSLM
DAASRLRYESVITIVGKVVARLDDTINDSLTTGKIEILVSEFIIESNAEALPLLVNSEQI
SPEETRLKYRFLDLRREKLHNNIMLRSQIIAHLRQIMTQGGFTEFQTPILTASSPEGARD
FLVPSRLHPGKFYALPQAPQQFKQLLMVSGFDRYFQIAPCFRDEDARADRSPGEFYQLDI
EMSFVTQEDIFNTIEPVMYEIFSKFSDKTVSNTPFVQIPYEEAMLKYGTDKPDLRNPLII
ADVTELFRESNFTIFKENIKNGSVVRAVPAPKTSTLPRSFFDKMAEFAISEGASGLGYIQ
FLEDGQVKGPIVKFLTEEQLLNLKSLANLQNGDTVFFTSDKVDKASKLAGKIRTKLGEDL
ALLKKDCFEFCWIIDFPFYELNEQTKKIDFSHNPFSMPQGGMEILESAKTVDDLLAIKAY
QYDIVCNGIELSSGAIRNHKPEIMYKAFEIAGYPPEIVDKRFGGMIRAFKFGAPPHGGIA
PGIDRIVMLLTDSTNIREVIAFPLNQQAEDLLMNAPDYIDEKALKELNINLSPSVKNKLL
AEGA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcataaatatagaacgcataattgtaatgaattgcgattgagtgatgtcggaaaaaga
gtaaaattatctggctgggtacatagaagaagggatcatggtaatttggtatttattgat
cttagggatcattttggtatcagccagttagtatttactgatcaagacccaagtttaatg
gatgctgctagtcggttaaggtatgaatcggtcataactattgtcggtaaagtggtagca
aggcttgatgacacaataaatgactcattaacgacaggtaaaattgaaatattggtaagt
gagtttataattgagtctaatgccgaagctctaccattattggtgaattctgaacaaatt
tctcccgaagaaactaggttaaaatatcgtttcctagatcttaggcgtgaaaagttgcat
aataacattatgctaagatcgcaaattattgctcatctacgtcagattatgacgcagggt
ggttttactgaatttcaaacaccaatcttaactgccagttcaccagaaggggctagggac
ttcttagtacccagccgattacaccctgggaaattttatgctttaccgcaagctcctcag
caattcaaacaattgcttatggtatcaggatttgatcgttattttcagatagctccttgt
tttagagatgaggatgcaagagctgataggtcgccaggtgaattttatcaattggatata
gaaatgtcttttgttacgcaggaagatatatttaatactattgaaccggtgatgtatgaa
atatttagcaaattttctgataagacagtatcaaataccccttttgtccaaattccatat
gaagaagcaatgttaaaatatggtactgataagccagaccttagaaatccgctaatcatt
gccgatgttaccgaattatttagagagtctaattttactatttttaaagaaaatataaaa
aatggctctgttgtaagagcggtgccagctcctaaaacttctactttaccgagaagcttc
tttgataaaatggcagaatttgcaatttccgagggggcaagtgggcttggttacatccag
tttctagaagatggacaagttaaagggcctattgttaaatttttaacagaggaacaatta
ttaaacttaaagtctttagcaaatctacaaaatggtgatactgtcttctttactagtgat
aaagttgataaagcctctaaacttgctggtaagattcgaactaaattaggcgaggattta
gctttacttaaaaaagattgttttgagttttgttggataatagatttcccattttatgaa
ttaaatgagcaaactaaaaaaatagattttagccataatccattttctatgccccaaggt
ggtatggagatattagaatcagctaaaacagtagatgatctacttgccattaaagcatat
caatatgatattgtttgtaatggtattgaattatctagtggagcaattagaaatcataaa
ccggaaataatgtataaagcttttgagattgctggatatcctccagaaattgttgataaa
agatttggtggaatgatcagagcatttaaatttggtgctccgccacatggtggaatagcc
cctggcatagataggattgttatgttattaaccgattcaaccaatattagagaggtgata
gcttttccactaaatcaacaggcggaagatttattgatgaatgctcctgattatattgat
gaaaaagctttaaaggagcttaatattaacttatcaccttcagtgaaaaataaactacta
gctgaaggagcttaa
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