Rickettsia endosymbiont of Culicoides impunctatus: LF885_04010
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Entry
LF885_04010 CDS
T10695
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Pathway
rem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LF885_04010 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rem03400
]
LF885_04010 (xth)
Enzymes [BR:
rem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LF885_04010 (xth)
DNA repair and recombination proteins [BR:
rem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LF885_04010 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UCM85177
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All DBs
Position
833099..833875
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AA seq
258 aa
AA seq
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MKIATWNINSIRMRLQHLRDFLTEVDPDIVLLQEIKCETEKFPFDELSDLAYNFYVHGQK
SYNGVAILSKFSADEVIKDFPAINCIDQARMIEITVQTPIGFCSITSLYAPNGSLVGSDK
FEMKLGFYDSLINYLQSKKSLDTKIIVGGDFNIAPFDIDVYSVKELQNTTCFTNEEKQRL
RIILNSGVEDLYRLSNPTKQEFSWWDYRAGCFEQNKGMRIDMILASSNVADYLDNCYMYY
NLRAKVKPSDHIPVVAII
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctacttggaatattaattccataagaatgagactacaacatttacgtgac
tttttaacggaagtagatcctgacattgttttgctacaagaaataaagtgtgagactgag
aaatttccttttgatgaattatcggacttagcgtataatttttatgtgcatggtcaaaaa
tcctataatggtgttgctattttatcaaaattttcagctgatgaagtgataaaagacttt
ccggcgattaattgtattgaccaagcacgaatgatagaaatcactgtacaaactccaata
ggtttctgtagtatcacttctttatatgcccctaacggttcattggtgggtagtgataaa
tttgaaatgaaattagggttttatgacagtttaattaattacttacaatccaagaaatct
cttgatactaagataatagttggaggggattttaatattgctccttttgatattgacgta
tactcagtaaaagagctacaaaatactacttgttttactaatgaagaaaaacaacgattg
agaattattttaaattctggggttgaagatttatatagattatcaaaccctactaaacaa
gaattctcttggtgggattacagagcaggctgttttgaacaaaataaaggtatgcgtatt
gatatgatacttgcctcgagcaatgttgcagattatttagataattgctacatgtattat
aatttacgagctaaagttaaaccttctgatcatatacccgttgtcgccatcatttag
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