Rickettsia endosymbiont of Culicoides impunctatus: LF885_04225
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Entry
LF885_04225 CDS
T10695
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Pathway
rem00020
Citrate cycle (TCA cycle)
rem00190
Oxidative phosphorylation
rem00720
Other carbon fixation pathways
rem01100
Metabolic pathways
rem01110
Biosynthesis of secondary metabolites
rem01120
Microbial metabolism in diverse environments
rem01200
Carbon metabolism
Module
rem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rem_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LF885_04225 (sdhA)
00650 Butanoate metabolism
LF885_04225 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LF885_04225 (sdhA)
00720 Other carbon fixation pathways
LF885_04225 (sdhA)
Enzymes [BR:
rem01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LF885_04225 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Thi4
Pyr_redox_2
HI0933_like
FAD_oxidored
fvmX2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
UCM85214
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Position
complement(882319..884112)
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AA seq
597 aa
AA seq
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MSTKSYNIVYHQFDVVVVGAGGAGLRATFGMAKEGLSTACISKVFPTRSHTVAAQGGISA
SLGNMGQDDWRWHMYDTVKGSDWLGDQDAIEYMCKHAAAAVLELEHYGVPFSRTEEGKIY
QRPFGGMTTNYGKGQAAQRTCAAADRTGHAILHTLYQQALKNKAQFFIEYFAIDLLMNNG
ECVGVVAWNLDDGTIHCFHSHLVVLATGGYGRAYFSATSAHTCTGDGGGMVARSSIALQD
MEFVQFHPTGIYGSGCLITEGARGEGGYLVNANGERFMERYAPAAKDLASRDVVSRAITM
EIRENRGVGEHKDHVFLHLDHLSPEILHERLPGISETAKIFAGVNVNTQPIPVLPTVHYN
MGGIPTNYHGQVIDKDQDNHHKIIPGLMSIGEAACVSVHGANRLGSNSLLDLVVFGRAAA
KKAAEIVKAGQPHKVLPQSILDKIISRFDGIRHAKGEIPVADLRLKMQKIMQNHAAVFRT
QEVLDQGKELIDQARKEYADIQINDKSLIWNSDLVEALELANLLDQAVITMHSAANRKES
RGAHSREDYLERNDEEWMKHTLAWIDEQGNVKLDYKPVTLTTLTDEVAAIPPAKRVY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtctactaaatcttataatattgtctaccatcaatttgatgtagtggtagttggagct
ggaggagctggtcttagggcaacttttggtatggcaaaagaggggttgagtactgcttgt
attagcaaggtttttcccactagaagccatactgtagcggcacaaggtggtatcagtgcc
tctcttggtaatatggggcaagatgattggcgttggcatatgtatgataccgtaaagggt
tcggattggttgggtgatcaagacgcgattgagtatatgtgtaaacatgcagctgccgcg
gtactggagcttgaacattatggggtacctttctcacgaacagaagaaggtaaaatttat
cagcgtccttttggtggtatgacgacaaattatggcaagggacaagctgcccaaaggact
tgtgctgcagcagatcgtacgggtcatgccatattacatactttataccaacaagcttta
aaaaataaagctcaattttttattgaatattttgccattgatttgttaatgaataatgga
gaatgtgtaggggtagttgcttggaatcttgatgatgggacaatacattgttttcattct
cacttagtagtattagctactggcggatatggtagagcttatttttctgccacaagtgct
catacttgtaccggtgatggagggggaatggtggcaagaagctccattgccttgcaggat
atggaatttgttcaattccatccaactggtatatatgggtctggttgcttaattacagaa
ggtgctaggggagaaggcggttatttagtaaatgccaatggtgaaagatttatggaacga
tatgctccagccgctaaagaccttgcttcaagagatgtggtttcaagagctattaccatg
gaaatcagagaaaatagaggcgtaggtgagcataaagatcatgtattccttcatttagat
catttatcgccggaaattcttcacgaacgtttaccgggtatttccgaaacagcaaagatt
tttgctggggttaatgttaacacccagccaataccggtattaccaacagtacattataat
atggggggaataccaacaaattaccatgggcaagttattgataaagatcaggataatcat
cataaaattattcctggattaatgtcgattggtgaggctgcctgcgtttcagtacatgga
gctaatcgattaggatcgaactctttgcttgatttagtggtatttggtagggcggcagca
aaaaaagctgctgaaattgttaaagcggggcaaccacataaggttctacctcaatcaata
ttggataaaataattagcagatttgacggtatacgtcatgctaaaggagaaataccagta
gctgatctaagactcaaaatgcaaaaaattatgcaaaaccatgcagcagtatttagaact
caagaagttctagatcaaggaaaagaactgattgatcaggcacgaaaggaatatgctgat
attcagatcaatgataaatcattaatatggaatagcgacttggttgaagcattagaatta
gctaatttattagaccaagcagtaattactatgcattctgctgccaatagaaaggaaagt
agaggggctcattctagggaggattatttagaacgtaacgacgaggagtggatgaaacat
acactggcttggattgacgaacaaggtaatgtcaaactagattataaaccggtaactctt
acaactttaacagatgaagtagcggcaattccgccagctaaacgagtttattaa
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