Rickettsia endosymbiont of Culicoides impunctatus: LF885_05145
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Entry
LF885_05145 CDS
T10695
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Pathway
rem03420
Nucleotide excision repair
rem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LF885_05145
03430 Mismatch repair
LF885_05145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rem03400
]
LF885_05145
Enzymes [BR:
rem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF885_05145
DNA repair and recombination proteins [BR:
rem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF885_05145
MMR (mismatch excision repair)
Other MMR factors
LF885_05145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_12
AAA_11
DEAD
DUF7651
ResIII
Motif
Other DBs
NCBI-ProteinID:
UCM85376
LinkDB
All DBs
Position
1077472..1079448
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AA seq
658 aa
AA seq
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MTQQSFLDSLNHQQLAAALHAHGPLLVLAGAGTGKTKVLTTRIANIINQGLASPGNILAV
TFTNKAAREMQDRISKMIDCYGLNIGTFHSIAAKILRQQAEFLNLSLNSRFTIISHDDQL
KLIKDIVKQRNIDPKKYVPKILHIIISRWKDQGLLPCKLSESDIKLPIHKVAKFIYDEYQ
QNLLASNVVDFGDLLLYNNELFIKNPEILKHYQERYQYILIDEYQDTNAVQYLWARMLAS
STKNICCVGDDDQSIYGWRGAEIGNILRFEKDFPDATVIKLEQNYRSSSEILSAASSVID
NNKNRHGKTLWTDKNDGQKIKIISCWNDKEEARFVVSEIDKLVTEGKYNASLVAILVRAG
FQTRAFEEVLISNALPYKIIGGLKFYERMEIRDLLSYIRITLNHSDSLALERIINVPRRA
IGNTTLKQIKDYADEHNIPILVAIRQMLQEGVVKNKVKDSLNQLITNIDNWNLRYQNEPA
LNVTKVLLEESGYLAMLQEEKTDEALGRIENINEMLRAIAEFDNIQDFIEHSSLVMENEA
LESNFGGSISIMTLHAAKGLEFDLVFLPGWEEGFFPHQRSLNEDGEKGLEEERRIAYVGI
TRAKKELYITYAESRFMFHEIIRSSPSRFISEIPNDVCIRTSSTKQLNYLGTKHKFSF
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacaaagctttctagattcattaaatcaccaacaactagcagcggctttacat
gcacatggacctcttcttgtacttgctggagcagggactggtaaaactaaagtattaaca
acaagaatagccaacataatcaatcagggtttagcgtcacctggcaatattttagcagtt
acttttaccaataaagcggctagagaaatgcaagatcgaatcagtaaaatgattgattgt
tatgggctaaacataggcacttttcattctatagcagccaagattttacgccagcaagca
gagtttttgaatcttagtttaaacagtagatttactattattagtcatgatgatcagctt
aaattgattaaagacatagttaaacagagaaatatagatcccaaaaaatacgttcctaaa
attttacatattattatctcgcgttggaaggatcaaggattattgccgtgtaaactttcg
gaatctgacattaagctaccgattcataaagtggctaagtttatctatgatgagtatcaa
caaaatttattagcatctaacgtagtggattttggagatttgctactatacaataatgag
ttatttataaaaaatcctgaaatattaaagcattatcaggaacgatatcaatatatttta
attgatgaatatcaagataccaacgctgtccaatatctttgggctaggatgcttgcgagt
agcacaaagaatatttgttgcgttggcgatgatgatcaatctatatatggttggcgtggt
gcagaaattggtaatatattacgttttgaaaaggattttccagatgctacagtaataaaa
ttagaacaaaattataggtctagttcagaaattttatcagctgcatccagtgtaattgac
aataacaagaatcgtcatggtaaaaccttgtggactgataaaaatgatggacaaaaaatt
aaaattatatcttgttggaacgataaagaagaagcaagatttgttgtatctgaaattgac
aaattagttacagaaggtaagtataatgccagtttagttgcgatattagttagagctggt
tttcaaactagagcatttgaagaagttctgattagtaatgcattaccatataaaataatc
ggtggtcttaagttttatgaacgaatggaaatacgtgatctactctcctacatacgtatc
actttaaatcatagtgatagtcttgctcttgaacgtataataaatgttccaagaagagcc
attggcaatactacattaaaacaaataaaagattatgcagatgaacataacatacctatt
cttgttgctattcgtcaaatgttacaagaaggagttgttaaaaataaggtcaaagatagt
ctaaatcagttaattactaacatagataattggaatttgcgatatcaaaacgagccagca
cttaatgtgacaaaggttttattagaagaatcaggttatctggcaatgttacaagaagaa
aaaactgacgaggcacttggcagaattgaaaacattaatgagatgcttagagcaattgca
gaatttgataatattcaggactttatcgaacattctagtttggtaatggaaaatgaagca
ttagaatcaaattttggtgggtctattagtattatgactctacatgctgccaaaggtctt
gaatttgatttagtttttttgcccggttgggaagaggggttttttccacatcaaagatca
ctaaatgaagatggggagaaaggtttagaagaagagcggagaattgcttatgttggtatt
actagagcgaagaaagagctgtatattacttatgccgaaagtcgttttatgtttcatgaa
ataattagatcatctccttctagatttattagcgaaataccgaatgatgtttgtattaga
acttcttcaaccaaacaacttaattaccttggtacaaaacacaaattttctttttaa
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