Rickettsia endosymbiont of Culicoides impunctatus: LF885_05785
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Entry
LF885_05785 CDS
T10695
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Pathway
rem00300
Lysine biosynthesis
rem00470
D-Amino acid metabolism
rem01100
Metabolic pathways
rem01110
Biosynthesis of secondary metabolites
rem01120
Microbial metabolism in diverse environments
rem01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LF885_05785 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LF885_05785 (dapF)
Enzymes [BR:
rem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LF885_05785 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UCM85479
LinkDB
All DBs
Position
1201543..1202352
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AA seq
269 aa
AA seq
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MFKKINFAKMYGLGNDFVIINQRDLPINCDLQQLSLNISNRRTGIGCDQFIIYDQKTNYY
EMAVYNQNGSSAKLCGNASRCLTKLLHLDFGITEVTLKIYGKELSCKILSDNEIEVNTGV
VSFEEDWMPSAEKIWPIMERYMIDIKEVICADIGNPHFIIFSDLATKDKEIIGEKLQAKE
LFTDGVNVNFASIKDNKIYLSVWERGVGLTLACGSGACASFASAVKLGFVSSPCEVVFQL
GSLQMSKQGENIMMLGSAALVVRGEFFYG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaaaaaaatcaatttcgctaaaatgtatggattaggtaatgattttgtgattatc
aatcagcgtgatttacctataaattgtgatttacagcaattatcgctaaatatctccaat
cgtcgtactggtattggttgtgatcagtttattatttacgatcaaaaaactaattactat
gaaatggctgtatataaccaaaatggctcaagtgccaaattatgtgggaatgcttcaaga
tgtctcaccaagttgttacatcttgatttcggtataacagaagttactttaaaaatatac
ggaaaagaattgtcttgtaagatattaagtgacaacgagatcgaggtgaatactggggta
gttagttttgaggaagattggatgccttcagccgaaaagatttggccaattatggagcgt
tatatgattgatatcaaggaagttatttgtgctgatattggcaatccacattttattatt
tttagtgatttagctactaaagataaagaaataattggagagaaattacaagcaaaagag
ttgtttactgatggggttaacgttaattttgcttcaatcaaggataataaaatttattta
tcggtttgggaaagaggagttggcttaactcttgcttgtggtagtggggcatgtgctagc
tttgcttcagcagtaaagcttggctttgttagctctccttgtgaagtagtctttcaatta
ggtagtctacaaatgtcaaaacaaggggagaatatcatgatgcttgggtctgctgcttta
gtggtacgtggagagtttttttatggctaa
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