Rickettsia endosymbiont of Culicoides impunctatus: LF885_05815
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Entry
LF885_05815 CDS
T10695
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rem Rickettsia endosymbiont of Culicoides impunctatus
Pathway
rem00550
Peptidoglycan biosynthesis
rem01100
Metabolic pathways
rem01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LF885_05815 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LF885_05815 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rem01011
]
LF885_05815 (mrdA)
Enzymes [BR:
rem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LF885_05815 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rem01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LF885_05815 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
aRib
Motif
Other DBs
NCBI-ProteinID:
UCM85485
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All DBs
Position
1206697..1208478
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AA seq
593 aa
AA seq
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MLNNKILHNQLISRRSFLIGSGKLTLFSLLAGKMFYMQLFESDKYCTLSDKNRISFILVP
PFRGQIYDVNGNVLATNQTCFRLLLDMHEANNYKQELILVANILQLTEEKQNYINQKIKK
ANKRVPLLILDNLSWQQMSLIEEQKLNLTSVFVDVGYVRFYHFSEAACHVIGYTGQINEQ
EKQELEINNLGDFNIGKSGVEKYYEEKLRGKFGYKQIEVNALGKQVREITNLPSQQGEDL
HLNIDAELQQRVQPYLTKQGCSAIVIDTNNGNVLVLAMSPVFEANNFVKLSQDYWQSLIN
DPYKPLINKTIQSTYPPGSIFKIITILAGLESGIKPDKTVNCTGDSVLGTNSFRCWSRHG
HGTVDMYNSIKHSCNSYMYEIARLTGHKKILDMARNFGFGTKTGIDLTGEASGFLPSEEW
KMKKFNSKWTIGDTLNLSIGQGFLSATPIQLARFVTAIANNGKLYNPRIAKDISVFDQVN
INQKYLDILKEGMYKAVNTEGGTAYYSRILAEGHQLAGKTGTAQVQAKANIDDDLSSKSV
VWQRRNHAIFAGFAPYQQPRYSILVFVDHGGGGGRAAAPIANKIMTMVLDKYS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgctaaataataaaatattacataaccagttaatatcaagacggtcttttctgataggt
tcaggaaaactgacattattttcattattggctggaaaaatgttttatatgcagttattt
gaaagtgataaatattgtactttatctgataaaaatcgtataagttttattctagttccg
ccattcaggggacaaatttatgatgttaacggtaatgttttagctaccaaccaaacttgt
tttaggttattactggatatgcatgaggctaataattacaaacaggaattaattctagta
gcaaatatcttgcaactaactgaagaaaaacaaaattacattaatcaaaaaataaaaaaa
gccaataaacgtgttcctttactgatattagataatcttagttggcaacaaatgtcactc
attgaagaacaaaagttaaatttaacttctgtttttgtagatgttggttatgtaagattt
taccatttttcagaagcggcttgtcatgtaataggttacactggacagattaatgagcaa
gagaaacaagagctagaaatcaataatttaggggattttaatattggtaaatctggtgta
gaaaaatattatgaagaaaagttacgtgggaaatttggttataagcagatagaagtaaat
gctttaggcaaacaagtcagagaaattaccaatcttccaagtcaacaaggagaggactta
catctaaatattgatgcagagttacaacaaagagtgcagccttatttaactaaacaaggc
tgttcggctatagttattgatacaaataatggtaatgttttagtgctggctatgtcgccg
gtatttgaagctaataattttgtaaaattgtctcaagattattggcaaagtttaattaat
gatccttataagccgttaattaataaaaccatacaaagtacttatccacctgggtctata
ttcaaaattattacaattttagctggtttagagagtggaattaaaccagataaaacggtt
aattgtactggggattcggtattaggtactaatagcttccggtgctggagtcgtcatggt
catggcacagtggatatgtataattccattaagcattcttgtaactcttatatgtatgaa
atagctcgcttaacaggtcataaaaaaatattagatatggcaagaaattttggtttcggt
acaaaaactggtattgatttgactggagaagcctcaggtttccttccttcagaagaatgg
aaaatgaaaaaatttaactctaaatggacgattggtgatactcttaacttatcgataggg
cagggatttttatcagctactccaatccagttagctaggtttgtaacggcaattgctaat
aatgggaaattgtataatcctagaattgctaaagatatatcggtatttgatcaggttaac
atcaatcaaaaatacttagatattttaaaagaaggcatgtataaagcagttaatactgaa
ggagggacggcttattatagtagaattttggcagaaggacatcaattagctggtaaaaca
ggtacggcacaagtacaagcaaaagctaatatagatgatgatttaagtagtaaatcagtt
gtttggcaaaggcgtaaccatgctatatttgccggattcgctccctaccaacaacctcgt
tactctattctggtctttgtcgatcatggcggaggtggaggtagggcagcggctcctata
gccaacaaaattatgactatggtgcttgataaatatagctaa
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