Rickettsiales endosymbiont of Stachyamoeba lipophora: EF513_00245
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Entry
EF513_00245 CDS
T05750
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ren
Rickettsiales endosymbiont of Stachyamoeba lipophora
Brite
KEGG Orthology (KO) [BR:
ren00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ren03016
]
EF513_00245
Enzymes [BR:
ren01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EF513_00245
Transfer RNA biogenesis [BR:
ren03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EF513_00245
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Flu_C_NS1
DNA_pol_B_2
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AZL15001
UniProt:
A0A3S8T0V7
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All DBs
Position
complement(59697..60305)
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AA seq
202 aa
AA seq
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MKVVLHKNDIPSFLDLGDQIAIDTEAMGLRNHRDRLCVIQLSSGNGQAHLVQFTDKTYDC
PNLKKLLADPTKLKILHFARFDVAIIRKYLGITLNPVFCTKIASKLARTYTDLHGLKELC
RELTGTTISKAQQTTDWGHPNLTKEQLDYAASDVLYLHEIKKKLEHMLAREGRSELAEAC
FKFLPFRAELDLQGWEEDIFAH
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtagttctccataaaaatgatattccatccttccttgatttgggcgatcaaatt
gctattgatacagaagcaatgggtttaagaaatcaccgcgatagactatgtgtaatccag
ctatcaagcggcaatggacaagcgcatttagtacaatttactgataaaacttatgattgt
cctaatctaaaaaagttgcttgccgatccaactaaacttaaaatactgcattttgctaga
tttgatgtggcaattattagaaaatatttagggataactttaaatcctgtattttgtaca
aaaatagcttccaagctcgctagaacttatactgatctacatggtcttaaagaattatgc
cgtgaactgaccggtacaaccatttctaaagcacaacaaactaccgactggggtcatcct
aatctcactaaggaacagcttgattatgctgcaagtgatgttctttacctccatgagatt
aagaaaaagcttgagcatatgctagcaagagaaggtagaagcgaattagcagaggcttgc
tttaagttcttaccttttagagctgaattagatttgcaaggctgggaagaagatattttt
gcacattaa
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