Rickettsiales endosymbiont of Stachyamoeba lipophora: EF513_00460
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Entry
EF513_00460 CDS
T05750
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ren
Rickettsiales endosymbiont of Stachyamoeba lipophora
Pathway
ren03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ren00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EF513_00460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ren03400
]
EF513_00460
Enzymes [BR:
ren01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EF513_00460
DNA repair and recombination proteins [BR:
ren03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EF513_00460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Intu_longin_3
bHLH_ILI
Motif
Other DBs
NCBI-ProteinID:
AZL15041
UniProt:
A0A3S8T101
LinkDB
All DBs
Position
110000..110803
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AA seq
267 aa
AA seq
DB search
MSKTKEQILNWYQEVGGDELIGHTKQSLIEQSSATSDKILSNIKTDKKALKPLNSGVLNN
QNEQSSSRVIADNCNDIHTLFEQIKNFEGCELKLTATNTVVGQGITDSEILMIGEAPGAQ
EDLEGRPFCGDSGKLLNMMLERIGLSRDKNFFITNTVFWRPPGNRRPTNEELELCRPFLE
KIIALMKPKLIIMVGSVSTFNLTGLNLNMNQLRSQTIEYTNSYLEQKIKCFTIFHPAFLL
RQPSQKKSTWFDLLKIKQYILNNHIKL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacgaaagaacaaatattaaactggtatcaagaagtcgggggtgatgaatta
atcggtcacaccaaacaaagcctgattgaacaaagcagtgctacttctgataagatatta
tctaacattaaaacagataaaaaagctttaaaaccgcttaattcaggtgtgttaaacaat
caaaacgagcaaagctctagtagagtaattgccgataattgtaatgatatacatacactt
tttgagcagattaaaaattttgaaggatgcgaattaaaacttactgccaccaacactgta
gtagggcaaggtataaccgattcggaaatcctaatgattggtgaagctccaggagcgcag
gaagatttagaaggaaggccattttgtggagatagcggcaagctattaaacatgatgtta
gaaagaattggactatcacgagataagaatttttttattaccaatacagttttttggcgt
ccaccaggtaatagaagacctactaatgaggaattggaactatgtagaccttttttagaa
aaaattattgcacttatgaaacctaagttaataataatggtaggaagtgtctccaccttt
aatctaactgggcttaatctcaatatgaaccaacttagaagtcaaactattgagtatact
aatagctatttagaacaaaagattaaatgctttaccatctttcaccctgcttttctgcta
agacaaccatcccaaaagaaaagtacctggtttgatttattaaaaatcaagcaatatatt
ttaaataatcatattaaactttag
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