Rickettsiales endosymbiont of Stachyamoeba lipophora: EF513_01950
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Entry
EF513_01950 CDS
T05750
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ren
Rickettsiales endosymbiont of Stachyamoeba lipophora
Pathway
ren00521
Streptomycin biosynthesis
ren00523
Polyketide sugar unit biosynthesis
ren00525
Acarbose and validamycin biosynthesis
ren00541
Biosynthesis of various nucleotide sugars
ren01100
Metabolic pathways
ren01110
Biosynthesis of secondary metabolites
ren01250
Biosynthesis of nucleotide sugars
Module
ren_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ren00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EF513_01950 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EF513_01950 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EF513_01950 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EF513_01950 (rfbB)
00525 Acarbose and validamycin biosynthesis
EF513_01950 (rfbB)
Enzymes [BR:
ren01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EF513_01950 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AZL15320
UniProt:
A0A3S8T1Y6
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Position
complement(435749..436741)
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AA seq
330 aa
AA seq
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MNFKSVLITGGLGFIGSNFASLIKSLYPNLLLVILDKVTYAASESNIDGLDCQVVYGDIA
DKSLVGGLLNKYNIDLVVNFAAESHVDNSINDPDSFVQTNIVGTYNLLNACLNYYLAKQN
FLFLHISTDEVYGSLGESGYFTERSNYQPNSPYSASKAASDHLVRAWFHTYNLPVIITNC
SNNYGPRQHSEKFIPKIIHCLINKQDIPIYGNGLNIRDWIHVDDHARGILLAILKGKIGE
SYCFGGDNEQTNIDIARLLCEIFAEISPGFAYGSLIKLVEDRKGHDFRYAIDSIKAKEDL
GYKAQHSDFRKSLKDTIKWYINLNQLTKAL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaatcagtattaattaccggaggcctgggctttataggcagtaactttgct
agcctcattaaaagtttataccctaacctactgttagtaattttagataaagttacttat
gctgcaagcgaatctaatattgacggacttgattgccaagtggtgtatggtgatattgct
gataaaagcttggtcggtgggttgctcaataagtataatattgatttggtggtaaatttt
gcagcggaatctcatgtagataattcaattaatgatcctgatagttttgttcaaactaat
attgttggtacttataatttactaaatgcttgtttaaattactatcttgctaaacaaaac
tttttatttttacatatttcaacagatgaagtttatggttcattaggagagagtggttat
tttactgagcgatcaaattaccaacctaactctccatattctgcttcaaaagctgctagt
gatcacttggttagagcttggtttcatacctataatttacccgtgataattactaattgt
agtaataattatggaccaaggcagcatagtgaaaaatttatccctaaaattattcattgc
ctaataaataagcaggatattcctatttatggtaatggattaaatattagggactggatt
catgttgatgatcatgcaagaggtattctactagccatcttaaaaggtaaaataggtgag
tcttattgtttcggcggggataatgagcaaactaatattgatattgctaggctgctatgt
gagatttttgctgagatttcccctgggtttgcttatggatcgctgattaaattggttgaa
gatcgtaaagggcatgattttagatatgccatagactccattaaggctaaagaagattta
ggttataaggcgcaacactcagattttagaaaatccctaaaagatactattaagtggtat
attaatttgaaccaattaactaaagcattatga
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