Rickettsiales endosymbiont of Stachyamoeba lipophora: EF513_04220
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Entry
EF513_04220 CDS
T05750
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ren
Rickettsiales endosymbiont of Stachyamoeba lipophora
Brite
KEGG Orthology (KO) [BR:
ren00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ren03021
]
EF513_04220 (rpoH)
Transcription machinery [BR:
ren03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EF513_04220 (rpoH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
FCSD_central
WAV3_C
Motif
Other DBs
NCBI-ProteinID:
AZL15751
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Position
914408..915268
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AA seq
286 aa
AA seq
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MKSNSLPVLTDQASLASYLAKIKAMPMLEAQEEYMLAKRMIEHKDIKAAQKLVTSHLKLV
VKIANQYRGYGLPMLEVISEGNIGLMQAVRKFDPELGFKLATYATWWIKASMQEYILKSW
SLVKIGTTAAQKKLFFNLRRMKSKIYALEHREMNPDDIKQIAKELEVTENEVKEMNLRML
SHDLSLNHKIGNTEDDEVINFIPENRPNQEIVIINKNEQLYKEKLFKKALAELDARELKI
VEERYLKDTPSTLEELSQMFMVSRERIRQLEERAVAKLKNYIRENY
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctaattcgttaccagtattaacagatcaagcgagccttgcaagttatttagca
aaaattaaagctatgcccatgcttgaagctcaggaagaatatatgctggccaaaaggatg
attgagcataaagatattaaggccgctcaaaagttagttactagtcatttaaaattggtc
gtaaaaattgctaatcaatatcgtggttatggcttgcctatgcttgaagtaatatccgag
ggtaatattgggttaatgcaagctgtacgtaagtttgatcctgagttgggttttaagctt
gccacctatgcaacctggtggattaaagcttcaatgcaggaatatattctgaaaagctgg
tctttggttaaaatcggcactaccgctgctcaaaaaaagttgttctttaatttaagaaga
atgaaatcaaaaatctatgctttagagcatcgcgaaatgaatccagatgatattaagcag
attgctaaagaattggaagtaaccgaaaatgaagtgaaagaaatgaatctgcgcatgtta
agccatgatttatcgcttaatcataaaatcggtaatacagaagatgatgaagttattaac
tttatccccgagaacagacctaatcaggaaattgtaataataaataaaaatgaacagcta
tataaagagaagctctttaaaaaggcgttagctgaattggatgcaagagagttaaaaatt
gtagaagaaagatatcttaaagatacaccctccactcttgaagaattaagccaaatgttt
atggtatcacgcgaaagaattagacaactagaagaacgcgcggttgccaaacttaaaaat
tacatcagagaaaattactaa
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