Rickettsiales endosymbiont of Stachyamoeba lipophora: EF513_04620
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Entry
EF513_04620 CDS
T05750
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ren
Rickettsiales endosymbiont of Stachyamoeba lipophora
Brite
KEGG Orthology (KO) [BR:
ren00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ren03032
]
EF513_04620
03036 Chromosome and associated proteins [BR:
ren03036
]
EF513_04620
03400 DNA repair and recombination proteins [BR:
ren03400
]
EF513_04620
DNA replication proteins [BR:
ren03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EF513_04620
Chromosome and associated proteins [BR:
ren03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EF513_04620
DNA repair and recombination proteins [BR:
ren03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EF513_04620
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Ribosomal_L12
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AZL15828
UniProt:
A0A3Q8T2C4
LinkDB
All DBs
Position
complement(1003960..1004247)
Genome browser
AA seq
95 aa
AA seq
DB search
MNKKQITTELQKANPLTMKEAKFIVETVFKAITEGLLKGKRTEIRGFGSLCIRQRKPRAA
RNPKTNTNIAIGERSVVYFRAGKELLNKVNKKKAA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaacaaattacaactgaattacaaaaagctaatccattaaccatgaaagaa
gcaaaattcatcgtggaaaccgtatttaaagcgattactgaaggtttactcaaaggtaaa
cgtacagaaattcggggatttggtagtctttgcattaggcagagaaaaccaagagctgcc
cgtaatcctaaaactaataccaacatagctattggcgaacgtagtgtggtatattttagg
gctggtaaagaactattaaacaaagttaataagaaaaaagcggcttaa
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