Rickettsiales endosymbiont of Stachyamoeba lipophora: EF513_05360
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Entry
EF513_05360 CDS
T05750
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ren
Rickettsiales endosymbiont of Stachyamoeba lipophora
Brite
KEGG Orthology (KO) [BR:
ren00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ren03032
]
EF513_05360 (gyrA)
03400 DNA repair and recombination proteins [BR:
ren03400
]
EF513_05360 (gyrA)
Enzymes [BR:
ren01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EF513_05360 (gyrA)
DNA replication proteins [BR:
ren03032
]
Prokaryotic type
DNA Topoisomerases
EF513_05360 (gyrA)
DNA repair and recombination proteins [BR:
ren03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EF513_05360 (gyrA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
YqbF
Motif
Other DBs
NCBI-ProteinID:
AZL15963
UniProt:
A0A3Q8T585
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Position
complement(1150807..1153542)
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AA seq
911 aa
AA seq
DB search
MSDLLNFSSLVPINIEEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYAMHESGCD
YNKPYRKSARIVGEVMGKYHPHGDAAIYDSLVRMAQDFSLRLPLIDGQGNFGSMDGDSAA
AMRYTESRLDEAAHSLLENIDENTVNFQPNYDGSEKEPTVLPARYPNILVNGAGGIAVGM
ATNIPPHNLGEVIDGCCLYIENNEVTFEELCEVIKGPDFPTGGTIMGLNGIKSAFATGRG
SVLIRGKTDIEETKEGKQAIIINEIPYQVNKARLVERIAELIKEKKIEGISDLRDESNKN
GVRVVIELKRDVVADVLLNQLYSLTSLQTSFGVNMLALDQGRPELMNLKHIIRAFVEFRE
EVITKRTKFRLGKARDRAHLLLGLAVAVSNIDEVITLIKAAPDAQAAKEQLMERSWNADI
VLPLLNIVEAKSIHITGNKLHLSELQAKAILEMRLQRLTGLEHQKIHDELEQIATDIKYY
LHILDSREELLTLLKQELHEIKEKFATPRRTNIEASEFEQDIEDLIPREEMVVTITMGGY
IKRVPLSTYRAQRRGGKGRAGVNMHEEDLTKELIVSSTHSHMLFFTSKGQVYRTKVYKLP
IGTPQSKGRALVNIFPLAQDEYISSALVLPEDKNEVTGKSIIFATKSGNIRRNDIADFES
IHAGGKIAIRLDDGDELIGVKLADEDNHVLLSTKAGKAIRFPIEALRIFKSRTSDGVRAI
RLASNDGVISLSILRGVEVQDITARDNYLSINLNLRKQIADSENPQELIQQIDAEIVNSL
TAEKIKYLADNEEFILTVTENGFGKRTSAYEYRITNRGGQGVTNIITSERNGLVVASFAV
LDGDHIMMVTDKGKIIRCPVHDIRISGRNTQGVKLFTTKQHEIVVSVTKISDEGDKEEEN
EGEEGLETSNE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgatttgttaaacttttcaagtttagttcctattaatattgaagaagaaatgcag
cgctcataccttgattatgctatgagcgtaattgtatcacgcgccttacccgacgtacgt
gatgggcttaagccggtgcatagacgtattttatatgcaatgcatgaatcaggctgcgat
tacaacaagccttatcgtaaatcagcaaggattgttggtgaagttatgggtaaatatcat
cctcacggtgatgcagcaatttacgattctcttgtacgtatggctcaggacttttcatta
agacttccactgattgatggtcagggtaactttggttcaatggacggcgactcagcagcg
gcaatgcgttataccgaatcaagacttgatgaagctgctcattctttacttgaaaatatt
gatgaaaatacggttaactttcagcctaactatgacggttctgaaaaagaacctactgta
cttcctgcccgctaccctaacatcctagtaaatggtgccggtggtattgcagttggtatg
gccactaatattccgccacataatttaggggaagttatcgatggctgctgcctctacatt
gaaaataatgaggtaacctttgaagaattatgtgaagtaattaaagggccagattttcct
accggtggtaccattatgggcttaaacggtattaaatcagcttttgccaccggcagaggt
tctgtacttattcgtggtaaaactgatattgaagaaaccaaagaaggcaaacaagctatc
attattaatgaaattccttatcaggttaacaaagctcgactcgttgaaagaattgctgaa
ttaatcaaagaaaagaaaatagaaggtatttctgatcttagggatgaatcaaataaaaac
ggcgttagagtagtaattgagcttaaaagagatgtagtagctgatgtacttttaaatcaa
ttatattcacttacttctcttcaaaccagctttggcgtcaatatgcttgcacttgatcaa
ggtcgcccggagctgatgaacctaaaacatatcattcgtgcttttgtagaatttagagaa
gaagttattactaaaagaaccaagtttagacttggtaaagctcgagatcgcgcacactta
cttttagggcttgcagtagcagtatctaacattgatgaagttattactttaattaaggct
gcccctgatgcacaagcagcaaaagagcaattaatggagcgctcatggaacgctgatatt
gttttacctttgctaaatattgttgaagcaaagtcaatccatattaccggtaataaatta
catttaagcgaattacaggccaaggctattttagaaatgcgcctgcaacgtttaactggc
cttgagcatcaaaaaattcatgatgaactggagcaaattgcaaccgatattaaatattat
ttacatatcttagactcaagagaagaactgctcactcttttaaaacaagaactacatgag
attaaagaaaaatttgcaacccctagaaggactaatattgaagcttcagaatttgagcaa
gatattgaagatttaattcctagagaagaaatggtggtaactattactatggggggttat
attaaacgtgttccactttccacttatcgtgcacaacgccggggcggtaaaggtagagcc
ggtgtaaatatgcatgaagaagatttaactaaagagttaattgtgtcttctacccactcc
catatgttattctttacatcaaaaggacaggtttatcgtactaaagtttacaaattacca
attggcactccacaatctaaaggtagggctttagtcaatattttcccacttgctcaagat
gaatatattagtagtgcattagtacttcctgaagataaaaatgaagtaaccggtaaaagc
attatttttgctaccaaaagcggtaatattaggcgtaatgacatagccgattttgaaagc
atccatgccggcggaaaaattgctattcgcttagatgacggggatgaattaattggtgta
aagcttgctgacgaagataatcatgtattactttctactaaagcaggtaaagctattcgt
ttcccaattgaagctttaagaatatttaaaagccgtacttctgatggagttagagcaatt
aggctggcaagcaatgatggagtaatttccttgtctattttacgtggagtggaagttcaa
gatattaccgcaagagataattatttaagcattaacctcaatttacgtaaacaaattgct
gatagcgaaaatcctcaagaactaatccaacaaattgatgcagagattgtaaactcgcta
acagctgaaaaaatcaaatatttagcggataatgaagaatttattctcactgttactgaa
aatggatttggtaagcgtacttctgcttacgaatatcggattaccaacagaggcggacaa
ggtgtaaccaacattatcacttcagaaagaaatggcttagtggttgccagctttgccgta
cttgatggcgatcatattatgatggtaactgataaaggtaaaattattagatgtccggta
catgatattcggatctccggtagaaacactcaaggggtaaaattatttaccactaagcaa
catgaaatagtagtttctgtcactaaaatttctgatgaaggtgataaagaagaagaaaac
gaaggcgaagaaggattagaaacaagcaatgagtaa
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