Rickettsiales endosymbiont of Stachyamoeba lipophora: EF513_05620
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Entry
EF513_05620 CDS
T05750
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ren
Rickettsiales endosymbiont of Stachyamoeba lipophora
Pathway
ren03420
Nucleotide excision repair
ren03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ren00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EF513_05620
03430 Mismatch repair
EF513_05620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ren03400
]
EF513_05620
Enzymes [BR:
ren01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EF513_05620
DNA repair and recombination proteins [BR:
ren03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EF513_05620
MMR (mismatch excision repair)
Other MMR factors
EF513_05620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
AAA_12
DUF6551
Motif
Other DBs
NCBI-ProteinID:
AZL16014
UniProt:
A0A3Q8T5K1
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All DBs
Position
complement(1207549..1209693)
Genome browser
AA seq
714 aa
AA seq
DB search
MNHELLQKLNQEQQKVVTNTNGPLLVLSGAGTGKTTSITSRIAYLISERLALPQQILAVT
FTNKAAREMLIRINNLIDAQGIWCGTFHSIATKILRIYAELVGFQNDFTIIDIDDQIRLV
KNIEESLNIDHRKYSPKNICSIIQSWKDLSIFPEQLDETLLTNDWRKKAAQIYTLYQRQL
KTANSMDFGDLLLYNIKLFQEQTDILSRFQERFKYIHVDEYQDTNKIQDLWVKLLAAKHQ
NICCVGDDDQSIYGWRGAEIANILGFTNYYQNCHIIKLEQNYRSTKNILAVAGEIIAKNK
QRYHKKLWSDLELGNKVWLSKLRNDHEEAEFICKAIDHFKHHGENLGSVAILVRASFQTR
VLEDKLLKNIIPFVVIGSLKFYDRLEIKDAIAYIRLSNNFNDNFAFERSVNTPKRGIGST
SLKQIQNYSLLYNISYYEAVKDMLSKQIFTGKIAKTLNEFITNLASWNELIKATSHTQVV
ETILKQSGYLEMWQNDPSIEAKGRVENLKELFRAIQDFASIAEFLEHVSLVSDNEQEGID
VKVKIMTLHASKGLEFNNVFLPGWEEGVFPSIKYRDQEQIATELEEERRLAYVGITRARQ
RLFISHTNERWMYGSVQYNLPSQFLDEIPNSLLHITRFDEVFSPDFLEQKPKILPIKTPQ
QNKGKNEPKQVYNKKVFHQKFGYGTVINSYDNKLDILFEQSGLKKIGIEFIEFC
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgaattattacaaaaacttaaccaagaacagcaaaaagtagtaacaaatact
aacggtcctttactagtgttatctggagcagggactggtaaaactacttcgatcacttct
cgtattgcatatttaatttcagagcgccttgctcttcctcagcaaatcttggcagtaacc
tttactaataaagcagcccgtgaaatgcttattagaattaacaacctaattgatgctcaa
ggaatctggtgtggcactttccattctattgctactaaaattttacgtatatatgcggag
ctagttggttttcaaaatgactttactattattgatatagatgatcagattaggttagtt
aaaaatattgaggaaagcctcaatattgatcatcgtaaatattcccctaaaaacatatgc
tctattattcagtcatggaaggatctatccatctttcctgaacaattagatgaaacctta
ttaactaacgattggcgtaaaaaggctgcccaaatctatactctttatcaacgacaatta
aaaactgctaacagcatggattttggcgatttattattgtataatattaaactatttcaa
gaacaaactgatattttaagcagattccaagaacgttttaagtatattcatgtagatgag
tatcaagatactaataaaattcaagatttatgggttaaattacttgcagctaagcatcaa
aacatttgttgtgtcggcgatgatgatcaatcaatttatggctggcgtggagcagaaata
gctaatattctagggtttactaattattatcaaaattgccatattatcaaattagaacaa
aattatcgttctaccaaaaatattcttgcagtagccggcgaaataattgctaagaataaa
caaagatatcataaaaaattatggagcgacctggaattaggtaataaggtgtggcttagc
aagcttagaaatgatcatgaagaggcagaatttatctgcaaagctatcgatcactttaaa
catcatggagaaaacttaggaagcgttgcgattttagtccgtgcttcatttcaaaccagg
gtattagaagataagttgctaaaaaacattattccctttgtggtaataggtagcttgaag
ttttatgatcgcttagaaattaaggatgcaatagcctatatacgattaagcaacaatttt
aatgataattttgcatttgaaagaagcgttaacacccctaaaagaggaattggaagtacc
agtttaaagcaaattcaaaattatagcttactatataatattagctattatgaagccgtt
aaagatatgctttccaagcaaattttcaccggtaaaattgctaaaactttaaatgaattt
attacaaatctagctagctggaatgaattaattaaagcgacctctcatacacaagtggta
gaaactatccttaaacaatctggttatctagaaatgtggcaaaatgatccctccattgaa
gctaaaggcagggtggaaaatttaaaagaattatttagagctatccaagattttgcaagc
attgcagagtttttagagcatgttagtctcgttagcgataatgaacaagaaggtattgat
gtcaaagttaaaattatgactttacacgcttccaaaggacttgaatttaacaatgtattt
ctacctggctgggaagagggagttttcccaagtatcaaatatcgtgatcaggaacaaatt
gctactgagcttgaagaagaacgcaggctagcttacgtaggaattactagagcacgccaa
agattgtttattagccataccaatgaaagatggatgtacggctcagttcaatataacctt
ccttcacaatttttagacgaaattcctaacagcttactacacattactcgatttgatgaa
gttttctctcctgattttcttgagcaaaaacctaaaatccttcctatcaaaactccacag
cagaacaaaggtaaaaacgaaccaaaacaggtatataataaaaaagtttttcatcaaaaa
tttggttatggtacagtaataaatagttatgataataaattagatatattattcgaacaa
agtggtctcaagaaaatcggcattgaatttatagagttttgttaa
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