Rickettsiales endosymbiont of Stachyamoeba lipophora: EF513_07045
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Entry
EF513_07045 CDS
T05750
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ren
Rickettsiales endosymbiont of Stachyamoeba lipophora
Brite
KEGG Orthology (KO) [BR:
ren00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ren03009
]
EF513_07045
Enzymes [BR:
ren01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
EF513_07045
Ribosome biogenesis [BR:
ren03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EF513_07045
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AZL16279
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Position
1525876..1526712
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AA seq
278 aa
AA seq
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MYRIQKKQTLVKKLPPKFNNNPPAISLSDNETMRIAKFIASCGICSRRDAEKLISEGKVK
INNQVIETPAIQVGSQDIVKVNDEVITLTSSQIYLYYKPQGLITTHKDEKGRTTVFESLP
SHLPRVISVGRLDVNSEGLLILTTDSNIAHYLESPQNELERTYKVRVFGRLDLVKLEEIS
KKGLRCDGIRYKPFEYEIINQTPNNTWLEITIHEGKNREVRNIMEYLEVRISRLIRIKYA
MFSLGNLLPGKIIKVADIATQNLLKIIKDENNHRNTQG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaattcaaaaaaaacaaactttagttaaaaagttacccccaaaatttaataac
aatccaccagccattagtttgtctgataatgagactatgcgtattgctaaatttatagca
tcttgtggaatatgttccaggcgtgatgctgagaaactaattagtgaaggcaaagttaaa
ataaataaccaagtgatagaaacccctgcaatccaagttggatcacaagatatagttaaa
gttaatgatgaagttattacactcacctcatcgcaaatttatttatattataaaccacaa
gggctaattaccacacataaagatgaaaaaggtcgtacaactgtttttgagagtcttcct
tctcacttaccgagagttatttcagtaggaagattagatgtcaatagtgaaggattactt
attcttactactgatagtaatatagctcattatttagaatcacctcaaaatgaattagaa
agaacttataaagtacgtgtttttggtagacttgatcttgtcaagctagaagaaatttct
aaaaaaggcctaagatgtgatggaattagatacaagccatttgaatatgaaattataaat
caaactcccaataatacttggcttgagattaccatacatgaaggaaagaatcgagaagtt
agaaatatcatggaatatttggaagtaagaatttctcgcctaattagaataaaatatgct
atgtttagcttgggtaatctattacctggaaaaattataaaagttgcagatattgctaca
caaaatttattaaagatcataaaagatgagaataatcacaggaatacacagggctaa
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