Candidatus Ruthia endofausta: HUE58_00290
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Entry
HUE58_00290 CDS
T06701
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
reo
Candidatus Ruthia endofausta
Pathway
reo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
reo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE58_00290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
reo03019
]
HUE58_00290
Messenger RNA biogenesis [BR:
reo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HUE58_00290
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QKQ23673
UniProt:
A0A6N0HMW1
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Position
complement(60941..61441)
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AA seq
166 aa
AA seq
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MIDSEGYQINTGIVIIDNKQQILLVKCFKQDSWQLPQSGIDFGESEFDALFQELNEEIDF
SSEHLNVLAKTLKWLRYDLPDYHIKHKQKSVCIAQKQVWFLLRLISDENNIKLDIHTQIE
FDDWAWVDYWRPIENMIDFKKPIYEDMLKALTSVFFNNQHKILRLF
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgattgatagtgaaggctatcagattaatactggcattgttattattgataacaaacaa
caaatacttctagtcaaatgctttaaacaagactcttggcaattaccacaaagtggtatt
gactttggtgagagtgagtttgatgcactttttcaagagcttaatgaagagattgacttc
tcctctgaacatttaaatgttcttgctaaaacacttaaatggctacgttatgatttgcct
gattatcatattaaacataaacaaaaatctgtgtgtattgctcaaaaacaagtttggttt
ttgttgcgtcttatctcagatgaaaacaatattaagctagacatacatacacaaatagaa
tttgatgattgggcatgggtagactattggcgccctattgaaaatatgattgattttaaa
aaaccaatttatgaagatatgctaaaagctctaacgtctgtattttttaacaatcaacac
aaaattcttagattgttttag
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