Candidatus Ruthia endofausta: HUE58_00385
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Entry
HUE58_00385 CDS
T06701
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
reo
Candidatus Ruthia endofausta
Pathway
reo00470
D-Amino acid metabolism
reo00550
Peptidoglycan biosynthesis
reo01100
Metabolic pathways
reo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
reo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HUE58_00385
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUE58_00385
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HUE58_00385
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
reo01011
]
HUE58_00385
Enzymes [BR:
reo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HUE58_00385
Peptidoglycan biosynthesis and degradation proteins [BR:
reo01011
]
Precursor biosynthesis
Amino acid ligase
HUE58_00385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
TTL
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
QKQ23690
UniProt:
A0A6N0HMZ4
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All DBs
Position
complement(71740..72621)
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AA seq
293 aa
AA seq
DB search
MIAVLVGGNSAERVVSLKSGGAVYQALISQNIDCFKFDWHGDNLSKLWQQEFDQAFIVLH
GRGGEDGYIQKQLENRGIRYTGSGSNASHNGMDKARTKMIWKQHNLTLAPSIVASINQSI
EPIDFPLPWAVKPTLEGSSIGISKVDNQTQLDEALTLAWQYNPHALVEQWIEGDEYTVAI
LGNKALPVVKIMADQGFYDFESKYHLNKTQYLCPCGLSPSQEQALQAIAFEAFFAINAKG
WGRVDFIINQHNKPYLLEINTVPGMTSRSLVPMAAKAMGISFDQLVIAIINEI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagtgctagtgggtggaaattcagcagagagagtagtttctcttaaaagtggc
ggggctgtttaccaagcgctaatcagccaaaatattgattgttttaaatttgattggcac
ggggataacttatcaaaactttggcaacaagagtttgatcaagcctttattgttttgcat
ggtcgtggtggtgaagacgggtatattcaaaaacaactagaaaaccgaggtattcgttat
acagggtctggctcaaatgccagccataatggcatggataaagcacgcactaaaatgatt
tggaaacagcataacctcacacttgcaccctctattgttgcaagcattaatcaatccatt
gagcctattgactttccactgccttgggcagttaagcccactttagaaggctctagtatt
ggcattagtaaagttgacaatcagacacaattagatgaggcactaacgcttgcttggcaa
tacaacccacatgctttagttgagcaatggattgaaggtgatgaatacacagtagcaatt
ttgggcaataaagccttacctgttgtgaaaattatggctgaccaaggtttttacgatttt
gaatcaaaataccacttaaataaaactcaatacttatgtccttgtggtttgagtccgtcc
caagagcaagcattacaagccattgcatttgaagcattttttgctattaatgctaaaggg
tgggggcgggtggatttcattattaatcaacataacaaaccttatttattagaaattaat
accgttccaggcatgacgtcacgctcattagtacccatggcagcaaaagcaatgggcata
agctttgatcaactagtcatagcaattattaatgaaatataa
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