Candidatus Ruthia endofausta: HUE58_00985
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Entry
HUE58_00985 CDS
T06701
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
reo
Candidatus Ruthia endofausta
Brite
KEGG Orthology (KO) [BR:
reo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reo03032
]
HUE58_00985 (gyrA)
03400 DNA repair and recombination proteins [BR:
reo03400
]
HUE58_00985 (gyrA)
Enzymes [BR:
reo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HUE58_00985 (gyrA)
DNA replication proteins [BR:
reo03032
]
Prokaryotic type
DNA Topoisomerases
HUE58_00985 (gyrA)
DNA repair and recombination proteins [BR:
reo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUE58_00985 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QKQ23793
UniProt:
A0A6N0HN97
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Position
181823..184402
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AA seq
859 aa
AA seq
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MSEYTEYPTHFKLNLPVVSIEDEMRNSYLEYAMSVIVGRALPDVRDGLKPVHRRVLYAME
ILGNDYNKSYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRNILIDGQGNFGSVD
GDSAAAMRYTEIRMAKLSHELLRDLEKDTVDFIDNYDGSESEPVVLPARIPNLLVNGSSG
IAVGMATNIPPHNLGEVIEACLKTIDNEDITIDELLEIMPGPDFPTAGIINGASDIRQAY
KTGKGKIYLRSVSHIEDEDKQSIVVTELPYQVNKAKLIGKIAELVKDKRINGITGLRDES
DKDGMRMVIELHRGEVPEVMLNNLYKLTEMQTVFGINMVAIDKGMPKLMTLKGILEAFIA
HRRDVVTRRSIFNLNKARNRAHLLEGLSAALHNIDDIIELIKSASNPADAKTALVAKTWR
GSVIKELIGDHDMATFKPEDLPKELGLQMNGDYQLSQKQAQAILDLKLHRLTGLEKDKIF
DEFNELLERIKYLLDILQTPERLIQVIREELIEIQSNYANARMTQILEHKIDLTLEDLIT
QEERMVTLSHGGYVKAQSLSDYQTQRRGGKGKAATKVKDEDFVDQLFIANSHDTVLCFSS
LGRAYWLKVFELPMASRIARGKPIVNLLPLEKEEVINAILPVSEFDENHFVFMVTNSGTC
KKTALTNFSKPRKGGIIAIELRDNDQLVGVEITSGEHDIMLFSANGKSIRFKESDVRVVG
RTAIGVRGIKLADADKVVSLIVANQDSPVLTATEKGFGKRTQLDEYRTQARGGSGVISIK
TSNRNGKVVGAIQVTDEDEMMLISNKGTLVRARAADVSIIGRNTQGVTLINIIKNEKLVS
VVKIAETEDEEVKSENDTE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtatactgaataccccacccatttcaagctaaatttaccagtagtttccatt
gaagatgagatgcgtaattcctatttggaatatgcaatgagtgttattgttgggcgtgca
ttgcctgatgttcgagacggacttaagcctgtgcatcgtcgcgtgctttacgctatggag
atcttgggtaatgattataataagtcctataaaaaatcagcgcgtattgttggtgatgtg
attggtaagtatcatccacatggtgatactgctgtgtatgacactattgtacgtatggcg
caaccattttcaatgcgcaatattttaattgatggtcaaggtaactttggctcagttgac
ggtgattcagctgctgccatgcgctatacagagattcgcatggctaaactttcgcatgag
ttattgcgagatctagaaaaagataccgttgactttattgacaattatgatggctcagaa
tcagaacctgtagtgttaccagcgcgtatacctaaccttttagtcaatggctcatcaggt
atcgcagtcggtatggcgactaacattccacctcataatttgggtgaagtgattgaagct
tgtttgaaaaccattgataatgaagacattactattgatgagttgttggaaatcatgcca
ggtccagattttccaacagcaggcattattaatggtgcaagtgatattcgtcaagcctac
aagactggcaaaggtaaaatttacttgcgttcagtatctcatattgaagacgaagacaag
caaagtattgttgtgaccgaacttccctatcaagttaataaagccaaactgattggtaaa
attgcagaacttgttaaagataagcgtattaatggtatcactggacttcgtgatgagtct
gataaagatggtatgcgcatggtaattgaattgcatcgtggcgaagtgccagaagtgatg
cttaataatttgtataagctgactgaaatgcaaactgtattcggtattaatatggtggcg
attgacaagggtatgccaaagttaatgacactaaaaggcatcctagaggcgttcattgct
catagacgtgatgtggtgactcgtcgctctatttttaatttaaataaagctagaaatcgt
gcacacttgttagaaggtttatcagctgcactacataacattgatgacattattgagttg
attaaatctgcttcaaacccagcagacgcaaaaacagcattagtggccaaaacttggcga
ggttcagtgattaaagagctgattggcgatcatgatatggcgacgttcaagccagaagat
ttgccaaaagaattaggtttacaaatgaatggcgattatcaattatcacaaaaacaagcg
caagctattttagatttaaaacttcatcgcttaacaggacttgaaaaagataagattttt
gatgaatttaatgaattgttagagcgcattaagtatctgctagatattttacaaacccct
gaaagactcatacaagttattcgtgaagagttaatagagattcaaagcaactatgctaat
gcccgtatgacgcaaatcttagaacacaagattgatttaacacttgaggatttaattact
caagaagagcgtatggtcaccttgtctcatggtggttatgtaaaagcacagtctttaagt
gattatcaaacacagcgccgtggtggtaaaggtaaagcagccactaaagtaaaagatgaa
gattttgttgatcagctgtttatcgccaattctcacgatacagttttgtgcttctcttcc
ttaggaagagcgtactggcttaaggtttttgagttgccaatggcatcacgcatagcgcgt
ggcaagccgattgttaacttattaccactagaaaaagaagaagtcattaacgctatttta
ccagtgtcagaatttgatgaaaatcattttgtctttatggtaaccaatagtggcacgtgt
aaaaaaacagcacttactaatttctcaaaaccacgcaaaggtggcattattgccatcgaa
ttaagagataacgaccagcttgttggcgtagaaatcacctcaggagagcatgatattatg
ctattttcagccaatggtaaatccattcgatttaaagaatcagatgtgcgtgtcgtagga
cgtacagccattggcgtacgtggcattaaattagcagatgctgataaagtggtatctctt
attgttgccaatcaagacagtccagttctgacagcaactgaaaaaggttttggcaagcgt
acgcagcttgatgagtatcgtactcaagcacgaggtggctcaggtgttatttccattaaa
acttcaaatagaaacggcaaagttgttggcgctattcaggtaactgatgaagatgagatg
atgttaatttccaacaaaggcactttagttcgtgctagagcggctgatgtttctatcatt
ggtcgtaacactcaaggcgtaaccttgattaatattattaaaaatgaaaaattagtctct
gttgtaaaaattgctgaaacagaagatgaagaagtgaaaagtgaaaatgacacagaataa
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