Candidatus Ruthia endofausta: HUE58_02005
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Entry
HUE58_02005 CDS
T06701
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
reo
Candidatus Ruthia endofausta
Pathway
reo03030
DNA replication
reo03430
Mismatch repair
reo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUE58_02005 (dnaX)
03430 Mismatch repair
HUE58_02005 (dnaX)
03440 Homologous recombination
HUE58_02005 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reo03032
]
HUE58_02005 (dnaX)
03400 DNA repair and recombination proteins [BR:
reo03400
]
HUE58_02005 (dnaX)
Enzymes [BR:
reo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUE58_02005 (dnaX)
DNA replication proteins [BR:
reo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUE58_02005 (dnaX)
DNA repair and recombination proteins [BR:
reo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUE58_02005 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_5
AAA_22
AAA_2
RCF1-5-like_lid
AAA_14
AAA_18
AAA_16
AAA_19
AAA_7
AAA_30
AAA_24
TsaE
Nab2
AAA_assoc_2
PIF1
nSTAND3
Glyco_tranf_2_5
Mg_chelatase
AAA_28
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKQ23964
UniProt:
A0A6N0HNR3
LinkDB
All DBs
Position
complement(376176..377765)
Genome browser
AA seq
529 aa
AA seq
DB search
MSEHYQVLARKYRPHSFAELVGQTHTKKTLINVLDANNLHHGFLFTGTHGVGKTTIARIF
AKSINCEQGISSTPCGKCPTCIEIDKAQSIDLIELDAASHTGVDNMRNILENAQYMPSKN
RYKIYLIDEVHMLSKSSFNALLKILEEPPEHVKFLLATTDPQKLPVTVLSRCLQFTLQQL
THDEILGQLKFIMDAEALSYEESALGQIADFSNGSMRDALSLLDQSISYGKGTVTNADIK
AMLGLVHHNDIIKLATHLFNQDAKAVIDFIKDLSHRSENLTNALKDLSSLFHKISIAQIV
DIETNKTVQNLSTQISNFDLQIFYQMSINGSKDMALAPSKQIGFEMTLLRMLAFRSDAQL
NTEKKTLRINPEVKTPAPIKEKLQPKAEEILSIVEPTTLDIHNQQQWETLAQALKFKGGA
QMLVKNTLFDDVSSTTLTLTLDNQFASLLNDHVQKSMLTTLREKFSTLNLVINLGKPNVQ
TLAQKQTQTHNEKMKKIQAEFLNDKGVQKLEKTFDTKININSIKEINHV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacactatcaagttttagctagaaaatatcgcccgcattcttttgctgaattg
gtaggtcaaacgcacactaaaaaaaccctaatcaatgtacttgatgctaataatttgcat
cacggttttttattcacaggcacacatggtgttggtaaaaccacaattgccagaatcttt
gccaaatctattaactgtgaacaaggcattagttcaaccccatgtggcaaatgccctact
tgtattgaaattgacaaagcccaatcaattgatttaattgagcttgacgctgcctcacac
acaggggttgataacatgcgcaatattttagaaaatgcgcaatatatgccaagcaaaaat
cgttataagatttatcttatcgatgaggtgcatatgctgtccaaaagcagttttaatgcc
cttttaaaaatccttgaagagccgccagaacacgttaaattcttattagcaactacagat
ccacaaaaactacccgtaactgttttatcgcgttgcttgcaattcacattacaacaacta
acccatgatgaaattctaggccaactaaaatttatcatggatgccgaagcgttaagctat
gaagaatcagcccttggtcaaattgctgattttagcaatggctcaatgcgcgatgcactg
agtttgcttgatcaatcaatctcttatggtaaaggtacggtaaccaatgctgacattaaa
gccatgttgggtttggtacatcataacgatattattaaactagcaacacatttatttaac
caagatgctaaagcggtgattgattttattaaagatttgtctcatcgtagcgaaaatctt
accaatgcacttaaagatttaagttcattatttcataaaatatctattgcacaaattgtt
gatattgaaactaacaagaccgttcaaaaccttagcacacaaatatcaaactttgattta
caaattttttatcaaatgtcaatcaacggctctaaagacatggcactagcccctagcaag
caaattgggtttgagatgacactacttagaatgttggcatttcgcagtgatgctcaactc
aacacagaaaaaaaaacgctaagaatcaaccctgaagttaaaacaccagcaccaattaag
gaaaaactacaaccaaaagcagaagaaatactaagcattgtagaacccactactcttgat
attcacaatcaacaacaatgggaaacacttgcccaagcgctaaaatttaaaggcggtgcg
caaatgttggtaaaaaacacactgtttgacgatgttagtagcacaacgttaacactaacg
ctggacaatcaatttgctagtttactaaatgaccatgtacaaaaaagtatgttaacaaca
cttagagaaaaattttcaacattaaatttggtaatcaaccttggcaaacccaatgtccaa
acattggcacaaaaacaaactcaaacacataatgaaaaaatgaaaaaaatacaagcagaa
ttcttaaatgataaaggtgtgcaaaaactagaaaaaacattcgatacaaaaattaatatt
aactcaattaaggagattaaccatgtttaa
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