Candidatus Ruthia endofausta: HUE58_02075
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Entry
HUE58_02075 CDS
T06701
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
reo
Candidatus Ruthia endofausta
Pathway
reo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
reo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUE58_02075 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
reo03021
]
HUE58_02075 (rho)
03019 Messenger RNA biogenesis [BR:
reo03019
]
HUE58_02075 (rho)
Transcription machinery [BR:
reo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HUE58_02075 (rho)
Messenger RNA biogenesis [BR:
reo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HUE58_02075 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
Mor
Motif
Other DBs
NCBI-ProteinID:
QKQ23977
UniProt:
A0A6N0HNW1
LinkDB
All DBs
Position
390048..391310
Genome browser
AA seq
420 aa
AA seq
DB search
MKLSELKKFSPEELLELAQSLGAENISRAKKQTLIFIILKAKAANDEEVLGDGVLEVLQD
GYGFLRSSDDSYTSGADDIYISPNQIRRFNLSTGDLVAGKIRAPKKGEKYFALIKVLEVN
GEDPDNVRNRVPFVSLTPIHPNERLNLEIGNGGTEDITARVIDLVSPFGKGQRGLLVAPP
KAGKTMIMQNIATSISVNHPECELIVLLIDERPEEVTEMARTVRGEVIASTFDESAKRHV
QVAEMVIQKAKRRAEQRKEVIILLDSITRLARAYNTIAPSSGKVLTGGVDANALQRPKRF
FGAARNIENGGSITIIATALIDTGSKMDEVIYQEFKGTGNMELHLEKRLSEKRIFPAINI
NASGTRREELITDEKELQKMWILRKILHPMDTVEAAEFLIDRLKLTKTNDEFFASMSQKK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatcagaacttaaaaaatttagcccagaagagttattagaattagcacaatct
ctaggtgcagaaaatatttctagagctaaaaagcaaaccttaattttcattattcttaaa
gctaaagcggctaatgatgaggaggtgttgggcgatggtgttttggaagtgttgcaagat
ggctatggatttttaagatcaagtgatgattcttacacctcgggtgcagatgatatttat
atttcacctaatcagattagacgttttaatttatcaactggtgatttggttgcaggaaaa
attagagcacctaaaaaaggtgaaaagtattttgctttaattaaagtattagaagtgaac
ggcgaagatccagataatgttagaaacagggtgccattcgtctctctaacacctattcat
cctaatgaaagactcaatttagaaatcggtaatggcggcactgaagatattactgccaga
gtgattgatcttgtttcaccttttggcaaaggtcaaaggggcttgttagttgcaccacct
aaggcaggcaaaaccatgattatgcaaaatattgccacgtctatttcagtcaatcatcca
gaatgtgaactgattgtacttttgattgatgagcgccctgaagaagtgacagaaatggct
cgcactgttcgtggtgaagtgattgcttcaacatttgatgaatcagcaaaacgccatgta
caagtagctgaaatggtgattcaaaaagccaaacgacgtgcagaacaacgcaaagaggtg
attattttactagattcaatcacacgcttggcacgcgcttataatacaattgccccttca
tcaggtaaggtattaacaggcggtgttgatgctaatgcactacaacgccccaaacgtttt
tttggtgcagctagaaatattgaaaatggtggaagtattaccattattgccactgcattg
attgatactggttcaaaaatggatgaagttatttatcaagagtttaaaggaacgggcaat
atggagcttcatttagaaaaacgtttgagtgaaaagcgaatttttccagcaattaatatt
aatgcttccggcacgcgccgcgaagagctaattactgatgaaaaagaattacaaaaaatg
tggattttacgcaaaattctccatcctatggataccgttgaggcggctgaattcttaatt
gatcgcttaaaattaaccaaaaccaatgatgagttttttgcttcaatgtcgcaaaagaag
taa
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