Candidatus Ruthia endofausta: HUE58_03220
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Entry
HUE58_03220 CDS
T06701
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
reo
Candidatus Ruthia endofausta
Brite
KEGG Orthology (KO) [BR:
reo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reo03032
]
HUE58_03220
03036 Chromosome and associated proteins [BR:
reo03036
]
HUE58_03220
03400 DNA repair and recombination proteins [BR:
reo03400
]
HUE58_03220
DNA replication proteins [BR:
reo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HUE58_03220
Chromosome and associated proteins [BR:
reo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HUE58_03220
DNA repair and recombination proteins [BR:
reo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HUE58_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
QKQ24166
UniProt:
A0A6N0HPD0
LinkDB
All DBs
Position
complement(593734..594009)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSDLVAAIAQTSNLTKADAARALDAMTGAITSALATGDNVAITGFGSFVVRDRAARTG
RNPQTGEAIQIKASKVPAFKAGKLLKESVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagatttagttgcagcaattgcacaaacttccaacttaacaaaagcagat
gcagctcgtgcattggatgcaatgacaggcgcaattacctcagcattagccactggtgat
aatgtagccattacaggttttggcagttttgttgtccgtgatcgtgcagcacgtactggt
cgcaatcctcaaacgggcgaagcaatccaaattaaggcctctaaagtgcctgcatttaaa
gcaggtaaattacttaaagaatcggttaattcttag
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