Candidatus Ruthia endofausta: HUE58_03720
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Entry
HUE58_03720 CDS
T06701
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
reo
Candidatus Ruthia endofausta
Pathway
reo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
reo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HUE58_03720 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reo03400
]
HUE58_03720 (xseA)
Enzymes [BR:
reo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HUE58_03720 (xseA)
DNA repair and recombination proteins [BR:
reo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HUE58_03720 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Lipin_N
YabA
Motif
Other DBs
NCBI-ProteinID:
QKQ24254
UniProt:
A0A6N0HPK1
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All DBs
Position
677953..679353
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AA seq
466 aa
AA seq
DB search
MFNIDEIYTISSFLSLCNKTIENKIPTCWLQGEISNLVRSASGHWYFSLKDSKTQVRCAL
FRLNQRHIKFDPENGMEVLVQAAPTLYEVRSYFQLIIQHLEPVGVGNLNLAFEQLKNKLA
SEGLFDNAHKKPLPNTINTIGVISSSTGAVIRDIIKVLNHRYPFADILLFDSIAQGQGSV
QKLTNALNAADQSGKCDVIIIARGGGSLEDLWAFNEEVLARAIFKARTPIISAIGHETDT
TIADFVADIRAPTPSAAAILVVPDRLELLTNTDKLYTQLHRSYQQTLHDYQSGLNQLKLR
IPSPNRQIAFFSQKLDHTNINLNSHAKSILTLNNAKLISLFSALKQHSPIETIKHSKVLN
QVSFTQLKDKIKQIINTNNNALHLANEKLQKIITTLTDKQKTTLSIQANSLHHLSPLNTL
SRGFSITTNAKNQVLSSTTNIKTNQTITTQLADGKLYSKIEKIEKN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatattgatgaaatttacaccatctctagttttttgtccttgtgcaataaaacc
attgagaataagattcctacttgttggctacaaggggaaatatccaatttagtacgctca
gcatcaggtcattggtatttttccctcaaagacagtaaaacccaagtgcgttgcgcttta
tttcggctcaatcagcgccatattaagtttgaccctgaaaatggcatggaggttttggtt
caagccgcacctaccttatacgaggtacggagttattttcaactcatcatccaacatctt
gagcccgtaggtgttggtaatttaaatcttgcctttgagcaactaaaaaataaacttgct
agcgagggtttgtttgataatgctcacaaaaaaccattgcctaatactattaatactatt
ggtgttatttcttcatcaacaggtgcggttattcgagatattattaaagtattgaatcac
cgctacccctttgctgatattttattatttgattcaatagctcaaggtcaaggctcagtg
caaaaactcacaaatgctttaaatgcagctgaccaatcaggcaagtgtgacgttattatt
attgccagaggtggtggctcattagaagacttatgggcgtttaatgaagaagtattggca
agagcaatctttaaagctagaacgccaattattagtgcaattggtcatgaaacggatacc
acaattgctgattttgttgctgatattcgcgcacccacaccaagtgctgctgccatattg
gtcgtacctgatcggctagaattactcaccaatacggataagttatacacacaactacat
cgatcttatcagcaaactttgcatgattatcaatctggccttaatcagcttaaattgaga
ataccaagcccaaataggcaaattgctttttttagtcaaaaacttgaccatacaaacatc
aatcttaacagtcatgcaaaatcaatactgactttaaataatgccaaacttatttcacta
ttttctgccttaaagcaacactcacctattgaaaccatcaaacattctaaggttttaaac
caagtttcttttactcagcttaaagataaaattaaacaaataattaacaccaataataat
gctctacatttagcaaatgaaaaacttcaaaagataattactactttgactgataaacaa
aaaaccacattatctatccaagccaactcgcttcatcacttatcaccacttaatacgctt
tcacgaggttttagtattaccactaatgcaaaaaatcaagtattatcctcaacaactaac
attaaaaccaaccaaaccattaccactcaattagccgatggaaaactatattctaaaatt
gaaaaaattgaaaaaaattaa
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