Candidatus Ruthia endofausta: HUE58_05645
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Entry
HUE58_05645 CDS
T06701
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
reo
Candidatus Ruthia endofausta
Brite
KEGG Orthology (KO) [BR:
reo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reo03032
]
HUE58_05645 (gyrB)
03400 DNA repair and recombination proteins [BR:
reo03400
]
HUE58_05645 (gyrB)
Enzymes [BR:
reo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HUE58_05645 (gyrB)
DNA replication proteins [BR:
reo03032
]
Prokaryotic type
DNA Topoisomerases
HUE58_05645 (gyrB)
DNA repair and recombination proteins [BR:
reo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUE58_05645 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QKQ24586
UniProt:
A0A6N0HQI4
LinkDB
All DBs
Position
997509..999917
Genome browser
AA seq
802 aa
AA seq
DB search
MSKKQSQEYQASSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYC
SKINITIHEDQSVSVSDDGRGIPVDIHPEEKISAAEVIMTMLHAGGKFDDNSYKVSGGLH
GVGISVVNALSEWVELTVYRSGKTHFQHYDIGVPDEPMKVIGKSDKTGTIIHFKPSVTVF
AITEFKYNILANRVRELSFLNSGVHIEIEELSTNKKDIFKYKGGIKAFVEHLNKAKNPIH
NNIITINAQRNDIKIDVALQWSDSYQESIYCFTNNIPQRDGGAHLAGFRGALTRTLNNYI
DNSSIAKKEKASITGEDTREGLTAIVSIKVSDPKFSSQTKDKLVSSEVRAPLESALSEKL
DDYLLENPTEAKIIIGKILDASHARNIARKAKEMSRRKGVLDIADLPGKLSDCQTKDPAE
SEIFLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKACFEKMLSSVEVGTLITALGCG
IGKEEYDITKLRYHKIVIMTDADVDGAHIRTLLLTFFYRYLPELIINGYLYIAQPPLYKI
KKGKQERYLKDNQELNDYLLQEAVNDAYFFISKEAPAISGVALESLVKEYYKINTIIDKL
SKRYNLTLLKAIASLTPIDDLINQENMNTWCINLTEKLNQAVTLTQKHTVTFNADSNEVE
YTLCVYGVDTDHIILNAVFFNSLEYQTIKKFSQKIESVITQESYVEKKAKQVKVDCFSHV
VDFLIEDAKKGQSFQRYKGLGEMNPEQLWETTMDPEQRTLLKVKIEDTIVADEVFSTLMG
DEVEPRRNFIEDNALSVDNLDF
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaacaatcacaagaatatcaagcctctagtattaaagttttaaaaggctta
gatgcggttcgaaagcgtcctggtatgtacattggtgataccgatgatggcactggattg
catcacatggtgtttgaagttgttgataatgctattgacgaagctttagctggatattgt
tcaaaaattaacataaccattcacgaagatcaatcagtttctgttagtgatgatggtcgt
ggtattcctgttgatattcatcctgaagagaaaatatctgcagcggaagtgattatgacc
atgctccatgcagggggtaaatttgacgataattcttataaagtatcaggtggattacat
ggtgtgggcatttctgttgttaatgcactaagtgaatgggttgaattaactgtgtatcgt
agtggtaaaactcattttcaacattatgatattggtgtacctgatgaaccaatgaaagtg
attggaaaatcagataaaacaggtacaatcattcacttcaaacccagtgttactgttttt
gcaattactgaatttaaatataatattttagcaaatcgtgttcgtgaattatcgttctta
aactcaggtgttcatattgaaattgaagaattatcaacaaacaagaaagatatttttaaa
tataaaggtggtattaaagcattcgtagagcatcttaataaagcaaaaaatccaattcat
aataatattattacaatcaatgcgcagcgtaatgatattaaaatcgatgttgcattgcaa
tggtctgattcttatcaggaaagtatttattgtttcacaaacaacataccacaaagagat
ggtggtgctcacttagctggttttagaggggcattaaccagaacacttaataattatatt
gataattctagcattgctaaaaaagaaaaagcttcaattacaggtgaggatactcgtgaa
ggcctaacagcgattgttagtattaaagtatctgatccaaaattttcatcacaaactaaa
gataaattagtatcaagtgaagtgagagcccctcttgaatcagcactaagtgaaaaactg
gatgattatttattagaaaacccaacagaagcaaaaattattattgggaaaattttagac
gcctcacatgcacgtaatatagctcggaaagcaaaagaaatgagccgtcgtaaaggggtg
cttgatatcgctgatttgccgggaaaattgagtgattgccaaacaaaagatcctgctgag
agtgaaattttcctagttgagggtgattctgcaggtggctctgccaaacaaggtcgtaat
cgtcgtacgcaagctattttaccccttaaaggaaaaatcttaaatgttgagaaagcatgc
ttcgaaaaaatgctatcttcagtagaagtgggcactttaattaccgcactaggttgtggt
attggcaaagaagagtacgatattaccaaattacgttatcataaaattgtgattatgaca
gatgcagatgtagatggtgcacacattcgtactctattgttaacctttttttatcgttat
ttgccagaattaattataaatggatatttatacattgcacaaccgcctttatataaaata
aaaaaaggaaaacaagaacgttatttaaaagataatcaagaattaaacgattatttatta
caagaagcggttaatgatgcgtatttctttatatcaaaagaagcgcctgctatctcaggt
gtggcattagaatctttggtgaaagaatattataaaataaataccattattgataaatta
tctaaacgctataatttaactttgctcaaagcaattgcgagtttaacacctattgatgat
ttaattaaccaagaaaatatgaacacttggtgtataaatttaactgaaaaattaaatcag
gctgtaacactaacacaaaaacatacggttacttttaacgctgattctaatgaagttgaa
tatacattatgcgtatatggagttgatactgatcatatcatactaaatgcagtattcttt
aattctcttgaatatcaaactattaaaaaattttctcagaaaattgaaagtgtaattact
caagaatcttatgttgaaaagaaagccaaacaagttaaagttgattgctttagtcatgtg
gttgattttttaattgaagatgctaaaaaaggtcaaagtttccaaagatacaagggttta
ggtgaaatgaaccctgaacaactttgggaaactaccatggatcctgaacaaagaacccta
cttaaagttaagattgaggataccattgttgctgatgaagttttctccaccctaatgggt
gatgaagtcgaacctagaagaaactttattgaggacaatgctctgtcggttgataactta
gatttttaa
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