Rhizobium etli bv. phaseoli IE4803: IE4803_CH00025
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Entry
IE4803_CH00025 CDS
T03667
Name
(GenBank) double-strand break repair helicase AddA type protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rep03400
]
IE4803_CH00025
Enzymes [BR:
rep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IE4803_CH00025
DNA repair and recombination proteins [BR:
rep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IE4803_CH00025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
AAA_30
NPHP3_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
AJC77301
LinkDB
All DBs
Position
complement(21380..24931)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSERSDLPDNDDPGAWIGWTTIQQAIASDPVRSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFERLADWVVLDDDDLSRRIIEIEGTAPDRIKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAALLSDARRALLTAT
APEEGGALAEAFAYVLNLGDESGLENLLGDIVANRNAIRRFTAAAEQQGGVDMVLRKRLG
LAADDTERGIAAQYWPLPELSGGTLQLYLSLADQKGGAKAQEVAYGLRLADREPDDARRA
AMLEKIFLTAKGEPKTDAQFLVKAMLAEAPKLAEAIATARAHVAASRDRLKLMRMHGATQ
AALVLADRLNHDYEELKKQRSQLDFEDLITRTADLLTKSGVGPWIHYKLDRGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGESARPIVRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVSDSGQSFSSVRLPLSFRSTADVLEAVDEIFRTSDNGRGLSAVGEPVVHRSSRIGHP
GAVDLWEMVAPEAVVKEEDWTAPFDATPESAPAAILARRIAHSIGALVGRETIVDKGKER
LIEAGDILVLVRKRDAFVNALTRALKRRGDIPVAGADRLTLTSHIAVQDLLALGRFLLLP
EDDLSLAAVLKSPLFDLSEEDIFAAAALRGDNESVWSHLKKFAADGNERFRMAVEKLELF
LRQSKTLPVHDFYARLLGSHGGRRQFLARLGTEVSDILDEFLTFTLDHESSGLPGLQSFV
STLELEAPEVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKAFTHTHLPKLRLIET
DPDEPPMPAWVPVADLSNSLTQNDAARIQILAEEEYRRLLYVAMTRAADRLVVCGYRGVR
ANNDTWHMMISTALSEGHPHVEAASFSDPDGEWQGIRWRVPRVERSFERIIRSEARDDEI
SLPEGLLRPLPPQAELPRPLSPSGAGTIIDEDEGGLVVASPLFSEKQRSDRSLEKGRLLH
RMLQALPDIPPEERPGAAQRYGERAARFWPEAERRKLVDSVLKLLDEKDLQPVLGEQARP
EVSIMGTLTLDGRRYAVSGRIDRLAVLTDRVVILDYKTNRVPPASEDAIPFAHRAQLAIY
REILAPLYPGKRIDCMLVYTENASLYTLSERALGLALAGLKTK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcggagcgaccttcctgataatgacgatccgggggcctggatcggctggacc
acgatccaacaggcgatcgcctccgatccggtgcgctcggcatgggtttcggccaatgcc
ggttccggcaagacgcatgtcctgacccagcgcgtcatccggcttctgctcgccggcgcg
cggccttcggccattctctgcctcacctataccaaggccgcggcttcggaaatgtcgaac
cgcgtcttcgaacggctggccgactgggtcgtgcttgacgatgacgatctcagccggcgg
atcattgagatcgaaggtacggcgcccgatcggataaaactggccgaggcccggcggttg
tttgccaaggcgctggagacaccgggcggcttgaagatccagacgatccacgccttttgc
gaggcgctgctgcatcagttcccactggaggccaatgtcgctgggcatttttcggttctc
gacgaccgcgccgccgcggcgctgctttccgatgcgcgccgggcgctgctgacggcgact
gcacctgaagaaggcggcgcccttgcagaggctttcgcctacgttctcaatctcggcgac
gaatccggcctggagaacctgctcggcgacattgtcgccaaccgcaacgccatccgccgc
tttaccgcggccgccgaacagcagggcggcgtggacatggttctgcgcaaaaggttgggg
ctcgccgccgatgacaccgagagaggcatcgcggcgcagtactggccgctgccggaactt
tcaggcggtacgctgcaactttatctgtcgctggccgatcaaaagggcggcgccaaagcg
caggaggttgcctatggcctcaggctcgccgaccgggagccggatgacgccagacgcgct
gcgatgctcgagaaaattttcctgacggccaagggcgagccgaaaacggacgcgcagttc
ctggtcaaggccatgcttgccgaggcgccgaaattggcggaggccattgccaccgcccgc
gctcatgtcgcggcaagccgcgaccggctgaaactgatgcggatgcacggggccacgcag
gccgcgctcgtgctcgccgaccggctgaatcacgattacgaggaactgaagaaacagcgc
agccaactcgatttcgaggacctgatcacccgcaccgccgacctgctgacaaagagcggc
gtcggtccctggatccattacaagctcgaccggggtatcgatcatatcctcgtcgacgag
gcgcaggataccagcccgatccaatggagcgtcatccagtcgctcgccgaggatttcttt
tccggcgagagcgcccggccgatcgtgcgcacgctgtttgccgtcggcgacgagaagcag
tcgatctattcctttcagggggcgcggcccgagcgtttttcggaggagagcgaccggacg
cggcggcgcgtctccgacagcggacagagcttttcttccgtgcggctgccgctctccttc
cgctcgactgccgacgtgctcgaggccgtcgacgagattttcaggacatccgacaatggg
cgcggcctcagcgctgtcggcgagccggtcgtgcatcgttccagccgcatcggacatccc
ggcgccgtcgacctctgggaaatggttgcgccggaagcggtggtgaaggaagaggattgg
acggcgcccttcgatgcgacgccggaaagcgcgccggccgcaattctcgcgcggcggatc
gctcattcgatcggcgcgctcgtcggccgtgaaacgatcgtcgacaagggcaaggagcga
ctgatcgaggccggcgatattcttgtgctggtgcgcaagcgcgacgccttcgtcaatgcc
ttgacccgcgccttgaagcgtcgcggcgacattcccgtcgccggcgccgacaggctcacc
ctgaccagccatatcgccgtgcaggatctgctcgcactcggccgcttcctgcttctgccg
gaagatgacctttcgctcgccgccgtgctcaagagcccgcttttcgatctgtccgaggag
gacatctttgcggccgcagcgctgcggggcgacaatgagagcgtttggagccatctcaag
aaattcgccgccgacggcaacgagcgtttccgcatggcggtcgaaaagctggaactgttc
ctccgacaatcgaaaaccctaccggtgcatgatttctatgcgcgcctgctgggcagtcac
ggcggacggcggcagtttcttgcccgcctcggcaccgaagtcagcgatatcctcgacgaa
ttcctgaccttcaccctcgaccatgagagctccggccttcccgggctgcaatccttcgtc
tcgacgctcgagctcgaagcgcccgaggtgaagcgcgagcaggacaagggacgcaacgag
gtcaggatcatgaccgtgcatgcctcaaagggtcttgaggcacccatcgttttcctggtc
gacggtggctccaaagccttcacgcatacgcatctgcccaagcttcgcctgatcgaaacc
gacccggatgagccgccgatgcccgcctgggttcccgtcgccgacctctccaattcgctg
acgcagaacgatgccgcgcgaatccagatactggccgaagaggagtatcgccggctgctc
tatgtcgccatgacgcgggccgccgaccggctggtcgtctgcggctatcgtggcgtgcgc
gcgaacaacgacacctggcatatgatgatttccaccgcgctcagcgaaggtcatccgcat
gtggaggcagccagcttctccgaccccgacggggaatggcagggcatcagatggcgcgtg
ccgcgggtggagcggagcttcgagcgtatcatccgcagtgaggcgcgcgacgacgaaatt
agcctgccggaaggcctgttgcggccattgccgccacaggcggaactgcctcggcccctc
agcccttccggcgccgggacgatcatcgacgaagacgaaggcggcctggttgtcgcctcg
ccgctcttttcagagaagcaacgcagcgatcgctcgctggagaaaggcaggctgctgcat
cgcatgctgcaggcgcttcccgatattccgccggaggagcggcccggtgccgcacagcgt
tacggcgaacgggcggcccgtttctggccggaggccgaacggcgcaagctggtcgattcg
gttctgaaactattggacgagaaagacttgcagcccgtcctcggcgagcaggcccggccc
gaggtctcgatcatggggacattgaccctcgacggcagacgctatgccgtctccggccgc
atcgataggctggcggtgcttaccgatcgcgtcgtcattctcgattacaaaaccaatcgc
gtgccgccggcgtccgaagacgccatcccctttgcacaccgggcgcagctggcgatctat
cgcgagatcctggcaccgctctatcccggcaagcgcatcgactgcatgctcgtctatacc
gagaacgcctccctctacacgctgagcgaaagggcgctcggtttggcgcttgcaggactg
aagacaaagtga
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