Rhizobium etli bv. phaseoli IE4803: IE4803_CH00383
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Entry
IE4803_CH00383 CDS
T03667
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Pathway
rep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IE4803_CH00383 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rep03400
]
IE4803_CH00383 (mutM)
Enzymes [BR:
rep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IE4803_CH00383 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IE4803_CH00383 (mutM)
DNA repair and recombination proteins [BR:
rep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IE4803_CH00383 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AJC77642
LinkDB
All DBs
Position
376073..376963
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AA seq
296 aa
AA seq
DB search
MPELPEVETVKRGLAPAMEGARVARLELRRRDLRFPFPDALADRVSGRTIIGLGRRAKYL
LVDLDDGNTLISHLGMSGSFRIEEGAVSETPGEFHHARSKDEKHDHVIFHLEGGGGPRRV
VYNDPRRFGFMDIVGRADLGAHPFFRDLGPEPTGNELGAAYLAERFRDKAQPLKSALLDQ
KNIAGLGNIYVCEALWRSHLSPIRAAGTLVTPGGKPKEKLGLLVASIRDVIADAIAAGGS
SLRDHIQTDGSLGYFQHSFSVYDREGQACGTPGCGGTVARIVQAGRSTFYCAACQK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccagaagtcgaaacggtcaaacgcgggctggcgccggcgatggaaggg
gctcgcgtcgcaaggctggagctgcgccgcagggacctgcgcttcccctttcccgatgcc
ctggcggacagggtttccggccgcaccattatcgggcttggccgccgcgccaaatatctg
ctggtcgatctcgacgacggcaatacgctgatttcccatctcggcatgtcgggttccttc
cgcatcgaggagggggccgtttccgaaacaccgggcgaattccaccatgcccgctctaaa
gacgagaagcacgatcacgtcatcttccacctcgaaggtggcggtggcccgcgccgcgtc
gtctataacgatccgcgccgcttcggctttatggatattgtcgggcgcgccgatcttggt
gctcatcccttcttccgcgatctcggcccggagccgacgggaaacgagctcggcgccgcc
tatctcgccgaacgtttccgcgacaaggcgcagccactgaaaagcgcgcttctcgaccag
aagaatattgccggtctcggcaatatatatgtctgcgaagcgctatggcgttcgcatctt
tcgccgattcgcgccgccggcacgctggtgacgccgggcggtaagccgaaggaaaaactc
ggcctgctcgtcgcctcgatccgcgacgtcatagccgatgcgatcgccgccggcggatcg
tcgctgcgcgaccatatccagacggacggatcgctcggctatttccagcattccttctcc
gtctatgatcgcgaaggccaggcttgcggcacgcctggctgcggcggtacggtcgcccgt
atcgtgcaggcgggtcgctccaccttctattgcgccgcctgccagaaatga
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