Rhizobium etli bv. phaseoli IE4803: IE4803_CH00433
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Entry
IE4803_CH00433 CDS
T03667
Symbol
rpoN-1
Name
(GenBank) RNA polymerase sigma-54 factor RpoN 1
KO
K03092
RNA polymerase sigma-54 factor
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Pathway
rep02020
Two-component system
rep02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IE4803_CH00433 (rpoN-1)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IE4803_CH00433 (rpoN-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rep03021
]
IE4803_CH00433 (rpoN-1)
Transcription machinery [BR:
rep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IE4803_CH00433 (rpoN-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
PP_kinase_C
Motif
Other DBs
NCBI-ProteinID:
AJC77692
LinkDB
All DBs
Position
426834..428393
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AA seq
519 aa
AA seq
DB search
MALSANLFLRQSQSLVMTPQLMQSIQLLQMTHFELNQFIAQEVEKNPLLEFPSDDGETGD
ERGAGEDEPFGQPPEDAGSDDGADNRAEALSSDWYDNGGSESTGRLNDELDANYTNVFPD
DGGPQRLDAPELVGQWKSMPGSTEGADYDLDDFVAGQLSLRDHLAQQIPFVLPDMTDRLI
AQNFVDQLDDAGYLQTDLVETGERLGTSVEQVEHVLAALQTLDPPGVFARSLAECLAIQL
RQKDRYDPAMQALVDNLELLARRDFATLKRLCGVDEEDLLDMLGEIRQLNPKPGSGFEAG
VSEAIMPDVVVRPSADGGWLVELNPDTLPRVLVNQSYFSRVTRNGEDHAFLSECLQSANW
LTRSLDQRAKTIMKVASEIVRQQDAFLLNGVDHLRPLNLKTVAEAIKMHESTVSRVTSNK
YMLTPRGLFELKYFFTVSISAVEGGDSHSAEAVRHKIRALIMQESPDAVLSDDDIVDMLK
KGGIDLARRTVAKYREAMNIASSVQRRREKRALAKVAGF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtccgccaatcttttcctgcgccagagccagtccctggtgatgacgccgcaa
ctgatgcaatccatccagttgctgcagatgacgcatttcgagctcaatcagttcatcgcc
caggaagtggaaaagaacccgctgctcgaattcccgtctgacgacggcgaaacgggtgac
gaacggggtgccggcgaggacgagccgttcggccagccgccggaagatgccggctctgac
gacggcgccgacaatcgcgctgaggcgctctccagcgactggtacgacaatggcggcagc
gagagcaccggccggctgaacgacgagctcgacgccaattataccaatgtctttcccgat
gacggcggcccgcagcgcctcgatgcgcccgagcttgtcggccagtggaagtcgatgccg
ggcagcaccgagggcgccgattatgatctcgacgatttcgtcgccggccagctgtcgctg
cgcgaccatctcgctcagcagatccccttcgtcctgcctgacatgaccgaccggttgatc
gcgcagaatttcgtcgatcaactcgatgatgccggctatctccagaccgatctcgtcgag
accggcgagcggctcggcacgagcgtcgaacaggtcgaacacgtgcttgccgccctccag
acgctcgatccgccgggtgttttcgcccgcagcctagccgaatgcctggcgatccagctc
aggcagaaggaccgctacgaccctgccatgcaggcgctcgtcgacaatctcgaactgctg
gcgcggcgcgatttcgccacgctgaagcggctctgcggcgttgacgaggaagaccttctc
gacatgctcggtgaaatccgccagcttaatccgaagcccggcagcggctttgaggcgggt
gtttccgaagcgatcatgcccgatgtcgtcgtcaggccctccgcggacggcggctggttg
gtcgagctcaatccggatacgctgccgcgcgtgctggtcaaccagtcctatttttcgcgc
gtgaccaggaacggtgaggatcatgccttcctttccgagtgcctgcagagcgccaactgg
ctgacgcgcagcctcgatcagcgggcaaagacgatcatgaaggtggcaagcgagatcgtc
cgccaacaggatgcgttcctgctcaacggcgtcgaccacctgcggccgctgaacctgaag
acggtggccgaggcgatcaagatgcacgaatccaccgtcagccgcgtcacctcgaacaaa
tacatgctgacgccgcgcggcctcttcgagctcaaatatttcttcacagtgtcgatcagc
gccgtcgaaggcggcgacagccattcggccgaggctgtgcgtcacaagatccgcgccctc
atcatgcaggagagcccggacgcggtgctctccgatgacgatatcgtcgacatgctgaag
aagggcggcatcgatctcgcccgccgcacggtggcgaaataccgggaagcgatgaacatc
gcctcctcggtccaacgccgccgcgagaagcgggcgctggccaaggttgcgggcttctga
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