Rhizobium etli bv. phaseoli IE4803: IE4803_CH00613
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Entry
IE4803_CH00613 CDS
T03667
Name
(GenBank) DNA helicase UvrD-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Pathway
rep03420
Nucleotide excision repair
rep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IE4803_CH00613
03430 Mismatch repair
IE4803_CH00613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rep03400
]
IE4803_CH00613
Enzymes [BR:
rep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IE4803_CH00613
DNA repair and recombination proteins [BR:
rep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IE4803_CH00613
MMR (mismatch excision repair)
Other MMR factors
IE4803_CH00613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
AJC77865
LinkDB
All DBs
Position
complement(608985..611045)
Genome browser
AA seq
686 aa
AA seq
DB search
MYLEKLNPQQRMAVEHGTLTDGSHIAGPLLVIAGAGSGKTNTLAHRVAHLIVKGADPRRI
LLMTFSRRAAAEMARRVERICRDVLGSKAGVMADALTWSGTFHGIGARLLRDYAQQIGLD
ADFTIHDREDSADLMNLIRHDLGFSKTESRFPAKGTCLAIYSRAVNSETALDQVLRDAFP
WCAAWETQLRELFACYVEAKQSQNVLDYDDLLLYWAQMVGESVIAEDIGSRFDHVLVDEY
QDTNRLQASILMALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPAAFSPPANIVTLDR
NYRSTQPILTAANAVIDLASERFTKNLWTERQSAERPRLVTVRDEAEQARYVADKVLDNR
EEGLKLKQQAVLFRASHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFAQNP
RDRVAGFRLMQILPGVGPSTAQKALDLMAEDASPLSALAAMPAPPRCGEDWAAFVSMLQE
MKSGKAGWPAEIELARQWYAPHLERLHEDAATRQADLLQLEQIAGGYASRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTRVFMLNVVDGCIPSDLAVGATAEIEEE
RRLLYVAMTRARDGLDLVVPQRFFTYGQNAQGDRHVYASRSRFIPATLLQFFEACSWPQV
KSDAAAQAQARQVRIDVGARMRGMWR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgaaaagctcaatccccagcagcgcatggccgtcgagcacggcacgctcacc
gacggcagccatattgccgggccgctgctggtcatcgccggcgccggttccggcaagacg
aataccttggcgcatcgggtcgcccatctgatcgtcaagggcgccgatccccgccgcatc
ctgctgatgaccttttcgcgtcgggccgccgccgagatggcgcggcgcgtcgagcgcatc
tgccgcgacgtgctcggttcgaaggccggcgtcatggccgatgcgctcacctggtccggc
accttccacggtatcggcgccaggctgctgcgcgactatgcccagcagatcggtctcgat
gccgacttcaccatccatgaccgcgaagacagcgccgacctgatgaacctcatccggcac
gatctcggcttctccaagacggaaagccgctttccggccaagggcacctgccttgccatt
tattccagggcggtgaattcggagacggcgctcgaccaggtgctgcgcgacgcctttccc
tggtgcgcggcctgggaaacacagctgcgcgagcttttcgcctgctatgtcgaggcaaag
cagagccagaacgtgctcgattacgacgacctcttgctctactgggcgcagatggtcggc
gagagcgtgatcgccgaggatatcggcagccgcttcgaccatgtgctggtcgacgaatat
caggataccaaccggctgcaggcctcgatcctgatggcgctgaagcccggcggtcgggga
ctgaccgtcgtcggcgacgatgcgcagtcgatctattccttccgcgcagcgacggtgcgc
aacatcctcgattttcccgccgccttcagcccgcccgccaatatcgtcacgctcgaccgc
aactatcgctcgacgcagccgatcctgacagccgccaacgccgtcatcgatctcgcctcg
gagcgcttcaccaagaatctctggaccgagcggcaatcggccgagcggccgcgcctcgtc
accgtgcgcgacgaggccgagcaggcgcgttatgtcgccgacaaggtgctcgacaatcgc
gaagagggcctcaagctcaagcagcaggcggtgctgttccgcgcctcgcatcacagcggg
ccgctggaggtcgagctgacccggcgcaacattcccttcgtcaagttcggcgggctgaaa
tttctcgacagcgcccatgtcaaggacatgctggccgcccttcgcttcgcccagaacccg
cgcgaccgggtggccggcttccgcctgatgcaaatcctgccgggcgtcggcccgtcgacg
gcgcagaaggcgctcgacctgatggccgaggatgcaagcccgctgtcggcgctcgccgcc
atgccggcgccgccgcgctgcggcgaggactgggcggctttcgtttccatgctgcaggag
atgaaatccggcaaggccggctggccggcggaaatcgagctagcgcggcaatggtacgcg
ccgcatctggagcgtctgcatgaggacgcggcaacgcggcaggccgatctgttacagctc
gagcagattgccggcggttatgcctcgcgtgagcgtttcctcaccgagctcaccctcgat
ccgccggatgcgaccagcgaccaggccggcgtgccgctgctcgacgaggattatctcatt
ctgtcgaccatccattcggccaagggccaggaatggacgagggttttcatgctcaacgtg
gtcgacggctgcattccgagcgatcttgccgtcggcgccaccgccgaaatcgaggaggag
cgccggctgctctatgtggcgatgacgcgtgcccgcgacggtctcgacctcgtcgtgccg
cagcgtttcttcacctacggacagaatgcgcagggcgaccggcacgtctatgcctcgcgc
agccgcttcattcctgcaaccctgctgcagttcttcgaggcctgcagctggccgcaggtg
aaatcggacgccgccgcgcaagcgcaggcgcggcaggtgcgcatcgatgtcggcgcccgg
atgcgcggcatgtggcgctag
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