Rhizobium etli bv. phaseoli IE4803: IE4803_CH03056
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Entry
IE4803_CH03056 CDS
T03667
Name
(GenBank) exonuclease RNase T/DNA polymerase III protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Pathway
rep03030
DNA replication
rep03430
Mismatch repair
rep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IE4803_CH03056
03430 Mismatch repair
IE4803_CH03056
03440 Homologous recombination
IE4803_CH03056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rep03032
]
IE4803_CH03056
03400 DNA repair and recombination proteins [BR:
rep03400
]
IE4803_CH03056
Enzymes [BR:
rep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IE4803_CH03056
DNA replication proteins [BR:
rep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IE4803_CH03056
DNA repair and recombination proteins [BR:
rep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IE4803_CH03056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJC80237
LinkDB
All DBs
Position
complement(3069835..3070425)
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AA seq
196 aa
AA seq
DB search
MKTIAIDFETANEQRGSACSVGLAWIEEGRVIRVEERLIRPREMRFSGMNIAIHGIRPED
VEDAPEFPEVMDEFHDDFSGATMIAHNAAFDFSVWRASLDLYRQSYPELTYLCSLKMAQR
IWPHFLSHRLNLIAEHLGLRFMHHNAAEDAAVCAAAAIEMAKAVKAKAVEAIPALIGMTP
GRLMARGYAPCTCRKA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaccattgcgattgatttcgagacggcgaacgagcagcgcggcagcgcctgttcc
gtcggccttgcctggatcgaagagggcagggtgatacgcgtcgaggaacggctgatccgg
ccgcgggagatgcgcttttccgggatgaacatcgccattcacggcatccggccggaagat
gtcgaggatgcgccggagtttcccgaggtgatggatgagttccatgacgatttcagcggc
gcgacgatgattgcgcataatgccgccttcgatttcagcgtctggcgggcgagcctcgat
ctctaccggcagtcctatcccgaactgacctatctctgcagcctgaagatggcgcagcgg
atctggccgcattttctctcgcaccgcctgaacctgatcgccgagcatctcggcctgcgc
ttcatgcaccacaacgccgccgaggatgccgccgtctgcgcggcagcggcgatcgagatg
gccaaggcagtcaaggcgaaagccgtcgaggcgatcccggcactgatcggcatgacgccg
gggcggctgatggcgcgcggctatgccccctgcacttgccgaaaggcctga
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