Rhizobium etli bv. phaseoli IE4803: IE4803_CH04339
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Entry
IE4803_CH04339 CDS
T03667
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Pathway
rep00300
Lysine biosynthesis
rep00470
D-Amino acid metabolism
rep01100
Metabolic pathways
rep01110
Biosynthesis of secondary metabolites
rep01120
Microbial metabolism in diverse environments
rep01230
Biosynthesis of amino acids
Module
rep_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IE4803_CH04339 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IE4803_CH04339 (dapF)
Enzymes [BR:
rep01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IE4803_CH04339 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AJC81474
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Position
complement(4398804..4399709)
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AA seq
301 aa
AA seq
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MSTTVEFARMNGLGNKILVVDMRGRPDKVTPAAAVALNADPETEFDQIMAIHDPKADGTD
AFIDILNSDGSKAQACGNGTRCVVQALAAETGRKAFTFQTVAGILNAVEHEDGTISVDMG
KPVFDWDRIPLAEEFHDTSRIELQIGPIDNPVLHSPSAMSMGNPHAIFWVDKDVMSYDLA
RFGPLLENHPMFPERANITLAQVTSPTSMTTRTWERGAGLTLACGSAACSAAVSAARTGR
TGRRVMINVASAKPPGTLSIEWRERDDHVIMTGPAEWEWSGRLDPATGLWSGDADRGAEA
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgacggtcgaattcgcgaggatgaacgggcttggcaacaagatcctggtcgtc
gacatgcgcggacggccggataaagtgacgcctgcggcggccgtcgcgctcaatgctgat
cctgagacagagttcgatcagatcatggcaatccatgatccgaaggccgacggcaccgat
gctttcatcgatatcctgaattccgacggctcgaaggcgcaggcctgcggtaacggcacg
cgctgcgtcgtgcaggcgcttgccgccgagaccggccggaaggccttcaccttccagacg
gtcgcgggcatcctcaacgccgtcgaacacgaggacgggacgatctccgtcgatatgggc
aagccggtcttcgattgggacaggatcccgctggccgaagaattccacgataccagccgc
atcgaactgcagatcggcccgatcgacaatccggtgctgcattcgccttccgccatgtcg
atgggcaacccgcatgcgatcttctgggtggacaaggacgtgatgtcctatgatctcgcc
cgcttcgggccgctgctggaaaaccatccgatgtttcccgagcgcgccaacatcactctg
gcgcaggtgacctcgccgacatcgatgacgacccgcacctgggagcgcggcgcgggtctg
acgctcgcctgcggttcggccgcctgttccgccgccgtcagcgccgcgcgcaccggccgc
accggccgcagggtgatgatcaacgtggcgagcgccaagccgccgggcacgctttcgatc
gaatggcgcgagcgcgacgatcatgtcatcatgaccggtccggccgaatgggagtggtcg
ggcaggctcgatcctgcgaccggcctctggtcgggcgatgcggaccggggagccgaggcg
cagtga
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