Rhizobium etli bv. phaseoli IE4803: IE4803_CH04412
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Entry
IE4803_CH04412 CDS
T03667
Symbol
rpoH-2
Name
(GenBank) RNA polymerase sigma-32 factor RpoH 2
KO
K03089
RNA polymerase sigma-32 factor
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rep03021
]
IE4803_CH04412 (rpoH-2)
Transcription machinery [BR:
rep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IE4803_CH04412 (rpoH-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
KORA
HTH_23
Sigma70_r3
HTH_3
HTH_10
RNase_E_G
GerE
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AJC81546
LinkDB
All DBs
Position
4480081..4480944
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AA seq
287 aa
AA seq
DB search
MKNMSADRRMIKIAMAAPYLARQEEHDLATRWKDHDDRGARNQIAMAHMRLVISMAGKFR
NFGLPMSDLVQEGYVGLLEAAARFEPERDVRFSTYASWWIRASIQDYILRNWSIVRGGTS
SAQKALFFNLRRLRAKLAKGDTQLTLQSIHQEIAAALGVSLADVQTMDARLSGNDASLQA
PSVSGDAESAEKMDFLVSDDPLPDEQVSNMIDGERRRVWLASALKHLNEREMKIISARRL
AEDGATLEELGADLGISKERVRQIESRAMEKLRTALVSADPHMAAYA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacatgtctgcagatcggcgcatgatcaaaatcgcgatggccgccccctatctc
gcccgccaggaagagcacgatctcgccacccgctggaaggatcatgacgatcgcggcgcg
cgcaaccagatcgccatggcgcatatgcgcctggtgatctccatggccggcaagttccgc
aatttcggtctgccgatgagcgacctcgtacaggagggctatgtcgggctgctggaggcc
gccgcccgcttcgagccggaacgcgacgtgcgcttttcgacctatgcgagctggtggatc
cgggcgtcgattcaagactatatcctgcgcaactggtcgatcgtgcgcggcggcacgagt
tcggcgcagaaggcgctgttcttcaatctgcgccgcctgcgcgccaaactcgccaagggc
gacacacaactgacgctccaatccatccatcaggaaattgccgcggcgctgggcgtcagc
cttgccgacgttcagactatggatgccaggctttccggcaacgacgcttcgctgcaggcg
ccttccgtctccggcgatgctgagagcgcggaaaagatggattttctcgtcagcgacgat
ccgctgcccgacgaacaggtttccaacatgatcgacggcgagcgccgccgcgtctggctc
gcctcggcgttgaaacatctcaacgaacgcgaaatgaagatcatcagcgcccggcgtctg
gccgaagacggcgccacgctcgaagagctcggtgccgatctcggcatttccaaggagcgt
gtgcgccagatcgaaagccgggcgatggaaaaacttcgtaccgcgctggtgagcgccgac
ccgcatatggcggcctacgcatag
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