Rhizobium etli bv. phaseoli IE4803: IE4803_PA00164
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Entry
IE4803_PA00164 CDS
T03667
Name
(GenBank) DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rep03032
]
IE4803_PA00164
03400 DNA repair and recombination proteins [BR:
rep03400
]
IE4803_PA00164
Enzymes [BR:
rep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IE4803_PA00164
DNA replication proteins [BR:
rep03032
]
Prokaryotic type
DNA Topoisomerases
IE4803_PA00164
DNA repair and recombination proteins [BR:
rep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IE4803_PA00164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AJC81808
LinkDB
All DBs
Position
pRetIE4803a:184470..185477
Genome browser
AA seq
335 aa
AA seq
DB search
MNAEVITELGLIYVSDTEPGIRRRRKGKGFSYVMPDGTTLSDELQRARIGALGLPPAYEN
VWICLYENGHLQATGIDARGRKQYRYHKDWQSFRSAGKFHQLIEFGRALPKIRRTVLRHL
DTGTEDVNGVLAALTTLLDEAHLRVGNQAYVRENGTYGATTLLKRHLKIVDGRIELKFRA
KGGKRVQRSLKHPRLQKILEEIADLPGRQLFVWKDESGALKPVDSGRLNAYLTEISGIPI
SAKTFRTWAGSLAAFGAAREKIVAGARPTVKDMSEAAAEALHNTPAISRSSYIHPAIIAL
AGNDHPLIEAGNEPLRGLRAEENRLLDFLTREIEE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgaagtcatcaccgaacttggcctcatctatgtcagcgataccgaaccgggc
atccgcagacgaaggaaaggcaagggcttcagctatgtcatgccggacggtacgacgctt
tccgatgagttgcagcgggcgcgcatcggcgcgctcggcctgccgccggcctatgagaat
gtctggatctgtctctacgagaacggccacctccaggcgaccggcatcgatgcgcgcggg
cgcaagcaatatcgctatcacaaggactggcaatccttccgcagcgccggaaaattccac
cagctgatcgaattcggccgggcattgccgaagatccgccgcaccgtgctgcgccatctc
gacaccggtacggaagatgtcaacggcgtgctggcggcactgacgacgctgctcgacgag
gcgcatctgcgggtcggcaaccaggcctatgtcagggagaacggcacctatggtgcgacg
acgctattgaagcggcacctgaagattgtcgacggacggatcgagctgaaattccgcgcc
aagggcggcaagcgcgtccagcgcagcctcaagcatcccaggctgcagaagatcctggaa
gagatcgccgacctgcccggccgtcagcttttcgtctggaaggatgaaagcggcgcgctg
aaaccggtcgattccggccggctgaatgcctatctgaccgagatttcgggcattccgatt
tccgctaagacattccgcacctgggccggatcgttggcggccttcggtgcggcccgcgaa
aaaattgtcgccggtgcccggccgacggtgaaggacatgtcggaggctgcggccgaagcg
ctgcacaatacgccggcaatctcacgctcgagctatatccatccggcaatcattgcgctc
gccggcaatgaccatccgttgatcgaggctggcaacgagccgctgcggggcttgcgggcg
gaagaaaacaggctacttgatttcctgacacgcgagatcgaggaatga
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integrated database retrieval system
