Rhizobium etli bv. phaseoli IE4803: IE4803_PB00475
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Entry
IE4803_PB00475 CDS
T03667
Symbol
nodD-3
Name
(GenBank) transcriptional regulator nodulation protein NodD 3
KO
K14657
LysR family transcriptional regulator, nod-box dependent transcriptional activator
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Module
rep_M00664
Nodulation
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rep03000
]
IE4803_PB00475 (nodD-3)
Transcription factors [BR:
rep03000
]
Prokaryotic type
Helix-turn-helix
LysR family
IE4803_PB00475 (nodD-3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AJC82515
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All DBs
Position
pRetIE4803b:complement(460769..461677)
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AA seq
302 aa
AA seq
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MRFKGLDLNLLVALDALMIERNLTAAARSINLSQPAMSAAVRRLRSYFRDELFTMRGREF
VPTPRAEDLAPAIREALQHIRLNIIPWDKFAPDQSDRHFRVSLCDFVTVVLFQKILERLA
REAPGISFDLLPLTDNPDELLRRGDVDFLISPPLFMSSAHPKIDLFQERLTCVGCSNNKQ
LEEALTAEEYSSMGHAVVRFGRTQQPTIEDCFLQEHGLKRRVEVVVSSFSMIPAALMGTD
RIATVPLRLVGLFEDKIPLRMTAPPITLPTFTEAVQWPVLHDKDPANIWMRDIMVQEAAR
LP
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttaagggcctcgatctaaatctccttgtcgcgctcgatgcactaatgattgag
cgcaaccttactgcggcggcacgtagcattaatctgagccagcccgcaatgagtgcagcc
gtccgccggctccgctcctatttccgcgatgaactattcacgatgcgtggtcgtgagttc
gttccaactccgcgtgcggaagacctcgcgcctgcgattcgtgaggctttacagcatatt
cggctcaatatcataccctgggataaatttgctcctgatcaatcagaccgtcatttccga
gtaagcttatgcgatttcgttacagttgttctttttcagaagatactggagcgtcttgcg
cgggaagcacccggcattagttttgacttgctgcctcttactgacaatccagacgagctt
ttgcgacgcggcgacgtagacttccttattagcccaccgttattcatgtcgagcgcgcac
cctaagatagatctatttcaggaacgactgacttgcgtcggctgcagtaataacaaacaa
cttgaggaagcccttactgccgaggagtattcatcaatggggcacgcggtagttaggttc
ggtcggacgcagcagcctaccatagaagattgcttcttgcaggagcatggcctcaagagg
cgggtcgaagtcgttgtttcaagctttagcatgatccccgccgccctaatgggcaccgat
cgcatcgcaaccgttccgttacgactagttgggctttttgaggacaagataccattgcgg
atgactgcgcccccgataacgctgccgacattcaccgaggcagtccaatggccggtactt
cacgacaaagatccggcaaatatctggatgcgagatataatggttcaggaggcagcgcga
ttgccgtga
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