Rhizobium etli bv. phaseoli IE4803: IE4803_PB00484
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Entry
IE4803_PB00484 CDS
T03667
Name
(GenBank) bacteriocin ABC transporter ATP-binding protein
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Pathway
rep02010
ABC transporters
rep02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IE4803_PB00484
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IE4803_PB00484
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rep01002
]
IE4803_PB00484
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rep02000
]
IE4803_PB00484
Peptidases and inhibitors [BR:
rep01002
]
Cysteine peptidases
Family C39
IE4803_PB00484
Transporters [BR:
rep02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
IE4803_PB00484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_29
AAA_23
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_30
AAA_25
AAA_24
nSTAND3
DUF87
nSTAND1
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AJC82524
LinkDB
All DBs
Position
pRetIE4803b:469899..472046
Genome browser
AA seq
715 aa
AA seq
DB search
MSSKAIKFKQRDITDCGAASLASVAAFYGYKLPLARIRQYASTDRSGTSVLGLTEAAQKL
GFIAKGVKGGFDSLSKIPKPAIAHVVKEDLHHFVVVHAIDAKWVIVMDPALGEICKVPHQ
EFMEQWTGVLVLLVPADTFNRRDETTSPLARFARLLAPHRTVMAQALVGALVTTVLSLST
AIYVQKIVDHVIPAGNRNLLNLMSIAMLLILAIQILINLLRGRLVLQTGQKIDACLILGY
YNHILALPQKFFDSMRMGEIVSRMNDAVKIRSFLNDVSINMFVDVLMILFSFGMMFIYSW
NIALIVALAIPMYILVYWAINRMNRNLQRVIMENDAKLEAQLVESLGAVSTIKTSGVESF
ANFKMETRFVKMLHSVYSSGLISICGDNASTLLSVLFTIVLMWFGTTLALEQAVTPGELL
SCYTLLGYINRPVARLIQTNRIVQDAFIAADRLFEIFELESASSSGIDATKTDLGDIRLE
NVTFRYGAQAEVFSDLSVSFRQGELTAIVGESGSGKSTLAALLQNVYQLEDGCIRIGQYA
LQDFSSASLHKVMAAVPQSIDVFSGSVIENIALGEFEPEFDKIVRICDRIGLRECIERWP
GRFQAHLGENGVRLSGGEKQRLALARALYRDPDVLILDEATSSLDSAAEEFVLRVVEDLS
RAGKTIIVITHRLSTVRGADNIVVLDKGRVIEEGKHADLLRTDGPYARLWRAPRS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaggccattaaattcaaacagcgtgacatcacggattgcggcgccgccagc
ctcgcatctgtcgcagccttctacggctacaagttgccattggcgcgcatccgccagtat
gcgtcgaccgaccgctccggtacgagtgtgctggggctcacggaagcggcgcagaagctg
ggcttcatcgcgaaaggcgtcaaaggtggcttcgacagcctgagcaagatccccaagccc
gctatcgcgcacgtcgtcaaggaggacctgcaccatttcgtagtggtccatgcgatcgac
gccaagtgggtcatcgtcatggacccggccttgggcgaaatctgcaaagtgccgcatcag
gaattcatggagcaatggaccggcgttctggttttgctggttccggcagacacattcaat
cgtcgagacgagaccacgtcgcccctagcccgattcgcccgcctactcgcgccacaccgc
acggtgatggcgcaggctctcgtcggcgctcttgtgacgaccgtcctcagtctctcgacg
gcgatctacgttcagaagatcgttgatcacgtgatcccagcgggaaaccgcaacctgctc
aacttgatgagcatcgcaatgctgctgatcctagcgatacagatcctgatcaaccttcta
agaggccgactcgtcctgcagacggggcagaagatcgacgcatgcttgatcctcggctat
tacaatcacatcctggccctgccccagaagttcttcgatagcatgcgcatgggagaaatc
gtgtcgcgcatgaacgacgctgtgaaaatcaggagcttcctgaacgacgtttcgataaac
atgtttgttgacgttttaatgatactgttctcattcggaatgatgttcatctattcctgg
aatattgctttgatcgtggcgctcgcaattccaatgtacatcctggtatattgggccatc
aatcggatgaatcgaaatctccaacgagtcatcatggaaaatgacgccaaactcgaggcg
caactggtagaatcactcggagctgtctccaccattaagacttccggcgtcgagagcttc
gcaaacttcaaaatggagacccgcttcgtaaagatgctgcattccgtctacagctccggg
ctgatctcaatctgcggcgacaacgcctcgacgttgctgtcggtcctgttcaccatcgtg
ctgatgtggtttggaaccacgcttgcgctcgaacaggccgtcacgcccggcgaattgctg
tcctgctatacgttgcttggctatatcaaccggccggtcgcccgcctgatccagaccaac
cggatcgttcaagacgcgtttatcgcggcggatagacttttcgagatctttgaactggag
tcggcaagcagcagcggcatcgatgctacgaagaccgatctcggagatattcgcctggag
aacgtcacgttccgctatggcgcgcaggcggaggttttcagcgatctaagcgtctccttt
cgccaaggagagttgacggccatcgtgggtgagagcggctcgggcaaaagcacccttgcg
gctctgctgcagaatgtctaccagcttgaggatggatgcattcggatcggccaatatgcc
ctccaggatttctcgagcgcatcactgcacaaggtcatggctgcagtaccgcaatcgata
gacgtcttctccggttccgtgatcgagaacatcgccctgggcgagttcgaaccggagttc
gataagatcgtacgcatctgtgatcgaataggactgcgggagtgcatcgagcgctggccc
gggcgtttccaggcccatctgggcgagaacggggttcgcctctccggaggtgagaagcag
cgcctcgcattggctcgggccctgtaccgggatcccgacgttctaatccttgacgaagcg
acctcctctctggactcggcagccgaagaatttgtgctgcgggttgttgaggatctgtct
cgcgctgggaagaccatcatagtcatcactcatcggttgagcaccgttcgtggggcggac
aatattgtggtcctggacaaggggcgggtcattgaggagggaaagcacgctgacctgctg
agaactgatggcccttacgctcgattatggcgggcgccaaggtcgtga
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