Rhizobium etli bv. phaseoli IE4803: IE4803_PD00022
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Entry
IE4803_PD00022 CDS
T03667
Name
(GenBank) GntR family transcriptional regulator protein
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rep03000
]
IE4803_PD00022
Transcription factors [BR:
rep03000
]
Prokaryotic type
Helix-turn-helix
GntR family
IE4803_PD00022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_10
HTH_Crp_2
TrmB
HTH_24
HTH_IclR
HTH_5
HTH_CodY
MarR_2
HTH_11
EAP30
HTH_41
HTH_29
HVO_A0261_N
HTH_28
NucS_C
MarR
GMT-wHTH
DUF3373
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AJC83227
LinkDB
All DBs
Position
pRetIE4803d:17948..18643
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AA seq
231 aa
AA seq
DB search
MSGALKDAAIRVERPAKTLRELALDKVREAIVNGYFRPGDRLVERDLCAQLGVSRTVVRE
VLRHLESEGLVANLPNKGPIVAQLDIEEAKQIYEIRGALEGMAARLCAERGSPEIVAALE
ESLSAIRNSYRDQDMAGVLANTSSFYQTLFTMVDRHVAWGVVNLLTVRINHLRSMTIKTE
RRGIEGPAQMSKIVDAIRRGDGEGAQQAAMDHVAAASAIAEAVLSAQKPAE
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgctctgaaggacgcagcaatcagggtcgagcgtcctgcgaagacattgcgg
gaactggcgctcgacaaggtccgcgaggccatcgtcaacggatacttccgtccgggagac
cggcttgttgagcgcgacctctgcgcccagctcggcgtcagccggacggtcgtgcgcgag
gttctgagacatctggaatcggaagggctcgtcgccaatctgccgaacaagggaccgatc
gtcgcccagctggatatcgaggaagccaaacagatctatgaaatccgcggtgcgctcgaa
ggcatggcggcgcggctctgcgctgaacgcggcagccccgagatcgtcgccgcgctcgag
gaatccctgagcgcaatccgcaacagctatcgcgatcaggatatggcgggggtgctggcc
aatacctcttccttctatcaaacgctgttcaccatggttgacaggcatgtcgcctggggc
gtcgtcaacctgcttaccgtacgcatcaaccatctgcgctcaatgacgatcaagacggaa
cggcgcggcatcgagggcccggcacagatgtcgaagatcgtcgacgccatccgccgcggc
gacggtgagggagcccagcaggcggcgatggatcatgtcgcagccgccagcgcaattgcc
gaagcggtactgtccgcccagaaacctgctgaataa
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